runtime error on OS X 10.6 (Snow Leopard)

Hdf-forum archives
1

What could cause an error like this?:

#000: H5Z.c line 273 in H5Zregister(): unable to modify predefined filters

This is observed with the MacPorts version of hdf5 1.8.3 and pytables:
http://trac.macports.org/ticket/21295

···

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Mark

2

Mark,

My initial reaction was this is because of a change in the API versioning of H5Z_class_t, but I'm having a hard time figuring out how this could happen. Have you applied the patch listed in the bug report? Was pytables compiled against the same hdf5 library that it's linked with?

Thanks,
-Neil Fortner
The HDF Group

···

On 09/11/2009 12:42 PM, Mark Moll wrote:

What could cause an error like this?:

#000: H5Z.c line 273 in H5Zregister(): unable to modify predefined filters

This is observed with the MacPorts version of hdf5 1.8.3 and pytables:
http://trac.macports.org/ticket/21295

3

With the patch applied it works. I had initially missed that someone had attached a patch to the ticket. Thanks for pointing that out.

···

On Sep 11, 2009, at 3:04 PM, Neil Fortner wrote:

Mark,

My initial reaction was this is because of a change in the API versioning of H5Z_class_t, but I'm having a hard time figuring out how this could happen. Have you applied the patch listed in the bug report? Was pytables compiled against the same hdf5 library that it's linked with?

Thanks,
-Neil Fortner
The HDF Group

On 09/11/2009 12:42 PM, Mark Moll wrote:

What could cause an error like this?:

#000: H5Z.c line 273 in H5Zregister(): unable to modify predefined filters

This is observed with the MacPorts version of hdf5 1.8.3 and pytables:
http://trac.macports.org/ticket/21295

--
Mark

4

Mark,

Glad to hear you've gotten it fixed. I'm still confused as to why it compiled, but looking back through my old emails it looks like a similar thing happened earlier (right before the patch was written).

-Neil

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On 09/11/2009 03:37 PM, Mark Moll wrote:

With the patch applied it works. I had initially missed that someone had attached a patch to the ticket. Thanks for pointing that out.

On Sep 11, 2009, at 3:04 PM, Neil Fortner wrote:

Mark,

My initial reaction was this is because of a change in the API versioning of H5Z_class_t, but I'm having a hard time figuring out how this could happen. Have you applied the patch listed in the bug report? Was pytables compiled against the same hdf5 library that it's linked with?

Thanks,
-Neil Fortner
The HDF Group

On 09/11/2009 12:42 PM, Mark Moll wrote:

What could cause an error like this?:

#000: H5Z.c line 273 in H5Zregister(): unable to modify predefined filters

This is observed with the MacPorts version of hdf5 1.8.3 and pytables:
http://trac.macports.org/ticket/21295

5

Hi Mark,

A Friday 11 September 2009 22:37:02 Mark Moll escrigué:

With the patch applied it works. I had initially missed that someone
had attached a patch to the ticket. Thanks for pointing that out.

I'm trying to release PyTables 2.1.2 very soon now. This will have this patch
integrated (as well as some other fixes).

···

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Francesc Alted