On Jun 4, 2015, at 2:03 PM, Pierre de Buyl <pierre.debuyl@chem.kuleuven.be> wrote:
The complaint by the compiler is about finding "mpi.h".
This file contains any messages produced by compilers while
running configure, to aid debugging if configure makes a mistake.
It was created by HDF5 configure 1.8.15, which was
generated by GNU Autoconf 2.69. Invocation command line was
$ ./configure --prefix=/opt/hdf5 --enable-fortran --enable-fortran2003 --with-zlib=/opt/zlib/include,/opt/zlib/lib --with-szlib=/opt/szip/include,/opt/szip/lib --enable-production --build=x86_64 --enable-parallel
## --------- ##
## Platform. ##
## --------- ##
hostname = turing
uname -m = x86_64
uname -r = 4.0.4-2-ARCH
uname -s = Linux
uname -v = #1 SMP PREEMPT Fri May 22 03:05:23 UTC 2015
/usr/bin/uname -p = unknown
/bin/uname -X = unknown
/bin/arch = unknown
/usr/bin/arch -k = unknown
/usr/convex/getsysinfo = unknown
/usr/bin/hostinfo = unknown
/bin/machine = unknown
/usr/bin/oslevel = unknown
/bin/universe = unknown
PATH: /opt/mpich/bin
PATH: /opt/intel/composer_xe_2013_sp1.0.080/bin/intel64
PATH: /opt/intel/composer_xe_2013_sp1.0.080/mpirt/bin/intel64
PATH: /opt/intel/composer_xe_2013_sp1.0.080/bin/intel64
PATH: /opt/intel/composer_xe_2013_sp1.0.080/bin/intel64_mic
PATH: /opt/intel/composer_xe_2013_sp1.0.080/debugger/gui/intel64
PATH: /usr/local/sbin
PATH: /usr/local/bin
PATH: /usr/bin
PATH: /usr/lib/jvm/default/bin
PATH: /usr/lib32/jvm/default/bin
PATH: /usr/bin/site_perl
PATH: /usr/bin/vendor_perl
PATH: /usr/bin/core_perl
## ----------- ##
## Core tests. ##
## ----------- ##
configure:3072: checking for a BSD-compatible install
configure:3140: result: /usr/bin/install -c
configure:3151: checking whether build environment is sane
configure:3206: result: yes
configure:3357: checking for a thread-safe mkdir -p
configure:3396: result: /usr/bin/mkdir -p
configure:3403: checking for gawk
configure:3419: found /usr/bin/gawk
configure:3430: result: gawk
configure:3441: checking whether make sets $(MAKE)
configure:3463: result: yes
configure:3492: checking whether make supports nested variables
configure:3509: result: yes
configure:3645: checking whether make supports nested variables
configure:3662: result: yes
configure:3685: checking whether to enable maintainer-specific portions of Makefiles
configure:3694: result: no
configure:3738: checking build system type
configure:3752: result: x86_64-pc-none
configure:3772: checking host system type
configure:3785: result: x86_64-pc-none
configure:3853: checking shell variables initial values
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install_sh='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
no_create=
no_recursion=
oldincludedir=/usr/include
pdfdir='${docdir}'
prefix=/opt/hdf5
program_prefix=NONE
program_suffix=NONE
program_transform_name=s,x,x,
psdir='${docdir}'
saved_user_CFLAGS=
saved_user_CPPFLAGS=
saved_user_CXXFLAGS=
saved_user_FCFLAGS=
saved_user_LDFLAGS=
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
silent=
site=
srcdir=.
subdirs=
sysconfdir='${prefix}/etc'
target=
verbose=
with_szlib=/opt/szip/include,/opt/szip/lib
with_zlib=/opt/zlib/include,/opt/zlib/lib
x_includes=NONE
x_libraries=NONE
configure:3856: result: done
configure:3905: checking if basename works
configure:3911: result: yes
configure:3916: checking if xargs works
configure:3922: result: yes
configure:3930: checking for cached host
configure:3937: result: none
configure:3997: checking for config x86_64-pc-none
configure:4005: result: no
configure:3997: checking for config x86_64-pc-none
configure:4005: result: no
configure:3997: checking for config pc-none
configure:4005: result: no
configure:3997: checking for config pc-none
configure:4005: result: no
configure:3997: checking for config x86_64-none
configure:4005: result: no
configure:3997: checking for config x86_64-none
configure:4005: result: no
configure:3997: checking for config x86_64-pc
configure:4005: result: no
configure:3997: checking for config none
configure:4005: result: no
configure:3997: checking for config none
configure:4005: result: no
configure:3997: checking for config pc
configure:4005: result: no
configure:3997: checking for config x86_64
configure:4005: result: no
configure:4017: checking for config ./config/site-specific/host-turing
configure:4025: result: no
configure:4102: checking for gcc
configure:4118: found /usr/bin/gcc
configure:4129: result: gcc
configure:4358: checking for C compiler version
configure:4367: gcc --version >&5
gcc (GCC) 5.1.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:4378: $? = 0
configure:4367: gcc -v >&5
Using built-in specs.
COLLECT_GCC=gcc
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: /build/gcc/src/gcc-5-20150519/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --disable-multilib --disable-werror --enable-checking=release --with-default-libstdcxx-abi=c++98
Thread model: posix
gcc version 5.1.0 (GCC)
configure:4378: $? = 0
configure:4367: gcc -V >&5
gcc: error: unrecognized command line option '-V'
gcc: fatal error: no input files
compilation terminated.
configure:4378: $? = 1
configure:4367: gcc -qversion >&5
gcc: error: unrecognized command line option '-qversion'
gcc: fatal error: no input files
compilation terminated.
configure:4378: $? = 1
configure:4398: checking whether the C compiler works
configure:4420: gcc conftest.c >&5
configure:4424: $? = 0
configure:4472: result: yes
configure:4475: checking for C compiler default output file name
configure:4477: result: a.out
configure:4483: checking for suffix of executables
configure:4490: gcc -o conftest conftest.c >&5
configure:4494: $? = 0
configure:4516: result:
configure:4538: checking whether we are cross compiling
configure:4546: gcc -o conftest conftest.c >&5
configure:4550: $? = 0
configure:4557: ./conftest
configure:4561: $? = 0
configure:4576: result: no
configure:4581: checking for suffix of object files
configure:4603: gcc -c conftest.c >&5
configure:4607: $? = 0
configure:4628: result: o
configure:4632: checking whether we are using the GNU C compiler
configure:4651: gcc -c conftest.c >&5
configure:4651: $? = 0
configure:4660: result: yes
configure:4669: checking whether gcc accepts -g
configure:4689: gcc -c -g conftest.c >&5
configure:4689: $? = 0
configure:4730: result: yes
configure:4747: checking for gcc option to accept ISO C89
configure:4810: gcc -c conftest.c >&5
configure:4810: $? = 0
configure:4823: result: none needed
configure:4848: checking whether gcc understands -c and -o together
configure:4870: gcc -c conftest.c -o conftest2.o
configure:4873: $? = 0
configure:4870: gcc -c conftest.c -o conftest2.o
configure:4873: $? = 0
configure:4885: result: yes
configure:4913: checking for style of include used by make
configure:4941: result: GNU
configure:4967: checking dependency style of gcc
configure:5078: result: gcc3
configure:5100: checking if unsupported combinations of configure options are allowed
configure:5110: result: no
configure:5125: checking if Fortran interface enabled
configure:5143: checking if Fortran 2003 interface enabled
configure:5241: checking for gfortran
configure:5257: found /usr/bin/gfortran
configure:5268: result: gfortran
configure:5294: checking for Fortran compiler version
configure:5303: gfortran --version >&5
GNU Fortran (GCC) 5.1.0
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5314: $? = 0
configure:5303: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: /build/gcc/src/gcc-5-20150519/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --disable-multilib --disable-werror --enable-checking=release --with-default-libstdcxx-abi=c++98
Thread model: posix
gcc version 5.1.0 (GCC)
configure:5314: $? = 0
configure:5303: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:5314: $? = 1
configure:5303: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:5314: $? = 1
configure:5323: checking whether we are using the GNU Fortran compiler
configure:5336: gfortran -c conftest.F >&5
configure:5336: $? = 0
configure:5345: result: yes
configure:5351: checking whether gfortran accepts -g
configure:5362: gfortran -c -g conftest.f >&5
configure:5362: $? = 0
configure:5370: result: yes
configure:5403: checking for Fortran flag to compile .f90 files
configure:5423: gfortran -c conftest.f90 >&5
configure:5423: $? = 0
configure:5432: result: none
configure:5567: checking for Fortran compiler version
configure:5576: gfortran --version >&5
GNU Fortran (GCC) 5.1.0
Copyright (C) 2015 Free Software Foundation, Inc.
GNU Fortran comes with NO WARRANTY, to the extent permitted by law.
You may redistribute copies of GNU Fortran
under the terms of the GNU General Public License.
For more information about these matters, see the file named COPYING
configure:5587: $? = 0
configure:5576: gfortran -v >&5
Using built-in specs.
COLLECT_GCC=gfortran
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: /build/gcc/src/gcc-5-20150519/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --disable-multilib --disable-werror --enable-checking=release --with-default-libstdcxx-abi=c++98
Thread model: posix
gcc version 5.1.0 (GCC)
configure:5587: $? = 0
configure:5576: gfortran -V >&5
gfortran: error: unrecognized command line option '-V'
gfortran: fatal error: no input files
compilation terminated.
configure:5587: $? = 1
configure:5576: gfortran -qversion >&5
gfortran: error: unrecognized command line option '-qversion'
gfortran: fatal error: no input files
compilation terminated.
configure:5587: $? = 1
configure:5596: checking whether we are using the GNU Fortran compiler
configure:5618: result: yes
configure:5624: checking whether gfortran accepts -g
configure:5643: result: yes
configure:5672: checking what gfortran does with modules
configure:5725: checking how gfortran finds modules
configure:5737: gfortran -Iconftestdir -c conftest.f90 1>&5
configure:5740: $? = 0
configure:5778: checking how to get verbose linking output from gfortran
configure:5788: gfortran -c -I. conftest.f90 >&5
configure:5788: $? = 0
configure:5806: gfortran -o conftest -I. -v conftest.f90
Using built-in specs.
Target: x86_64-unknown-linux-gnu
Thread model: posix
gcc version 5.1.0 (GCC)
/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/f951 conftest.f90 -I . -quiet -dumpbase conftest.f90 -mtune=generic -march=x86-64 -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/finclude -o /tmp/cc5B0Jtw.s
GNU Fortran (GCC) version 5.1.0 (x86_64-unknown-linux-gnu)
compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2-p11, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (GCC) version 5.1.0 (x86_64-unknown-linux-gnu)
compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2-p11, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v -I . --64 -o /tmp/ccK4bt2n.o /tmp/cc5B0Jtw.s
GNU assembler version 2.25.0 (x86_64-unknown-linux-gnu) using BFD version (GNU Binutils) 2.25.0
Reading specs from /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/libgfortran.spec
rename spec lib to liborig
/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/collect2 -plugin /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper -plugin-opt=-fresolution=/tmp/ccWKKPBf.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crt1.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/crtbegin.o -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. /tmp/ccK4bt2n.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/crtend.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crtn.o
configure:5889: result: -v
configure:5891: checking for Fortran libraries of gfortran
configure:5914: gfortran -o conftest -I. -v conftest.f90
Using built-in specs.
Target: x86_64-unknown-linux-gnu
Thread model: posix
gcc version 5.1.0 (GCC)
/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/f951 conftest.f90 -I . -quiet -dumpbase conftest.f90 -mtune=generic -march=x86-64 -auxbase conftest -version -fintrinsic-modules-path /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/finclude -o /tmp/ccyHgq0y.s
GNU Fortran (GCC) version 5.1.0 (x86_64-unknown-linux-gnu)
compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2-p11, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
GNU Fortran2008 (GCC) version 5.1.0 (x86_64-unknown-linux-gnu)
compiled by GNU C version 5.1.0, GMP version 6.0.0, MPFR version 3.1.2-p11, MPC version 1.0.3
GGC heuristics: --param ggc-min-expand=100 --param ggc-min-heapsize=131072
as -v -I . --64 -o /tmp/cci78AFq.o /tmp/ccyHgq0y.s
GNU assembler version 2.25.0 (x86_64-unknown-linux-gnu) using BFD version (GNU Binutils) 2.25.0
Reading specs from /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/libgfortran.spec
rename spec lib to liborig
/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/collect2 -plugin /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/liblto_plugin.so -plugin-opt=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper -plugin-opt=-fresolution=/tmp/ccwIrIli.res -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lquadmath -plugin-opt=-pass-through=-lm -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc -plugin-opt=-pass-through=-lc -plugin-opt=-pass-through=-lgcc_s -plugin-opt=-pass-through=-lgcc --build-id --eh-frame-hdr --hash-style=gnu -m elf_x86_64 -dynamic-linker /lib64/ld-linux-x86-64.so.2 -o conftest /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crt1.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crti.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/crtbegin.o -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. /tmp/cci78AFq.o -lgfortran -lm -lgcc_s -lgcc -lquadmath -lm -lgcc_s -lgcc -lc -lgcc_s -lgcc /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/crtend.o /usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/crtn.o
configure:6110: result: -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath
configure:6126: checking for dummy main to link with Fortran libraries
configure:6160: gcc -o conftest conftest.c -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath >&5
configure:6160: $? = 0
configure:6205: result: none
configure:6237: checking for Fortran name-mangling scheme
configure:6250: gfortran -c -I. conftest.f90 >&5
configure:6250: $? = 0
configure:6291: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath >&5
/tmp/ccY01qfA.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `foobar'
collect2: error: ld returned 1 exit status
configure:6291: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> /* end confdefs.h. */
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char foobar ();
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return foobar ();
> ;
> return 0;
> }
configure:6291: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath >&5
configure:6291: $? = 0
configure:6349: gcc -o conftest conftest.c cfortran_test.o -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath >&5
configure:6349: $? = 0
configure:6391: result: lower case, underscore, no extra underscore
configure:6460: checking if Fortran compiler supports intrinsic SIZEOF
configure:6469: gfortran -o conftest -I. conftest.f90 >&5
configure:6469: $? = 0
configure:6470: result: yes
configure:6484: checking if Fortran compiler supports intrinsic C_SIZEOF
configure:6496: gfortran -o conftest -I. conftest.f90 >&5
configure:6496: $? = 0
configure:6497: result: yes
configure:6511: checking if Fortran compiler supports intrinsic STORAGE_SIZE
configure:6522: gfortran -o conftest -I. conftest.f90 >&5
configure:6522: $? = 0
configure:6523: result: yes
configure:6539: checking if Fortran default REAL is DOUBLE PRECISION
configure:6566: gfortran -c -I. conftest.f90 >&5
configure:6566: $? = 0
configure:6567: result: no
configure:6582: checking if Fortran compiler version compatible with Fortran 2003 HDF
configure:6601: gfortran -o conftest -I. conftest.f90 >&5
configure:6601: $? = 0
configure:6602: result: yes
configure:6736: checking for g++
configure:6752: found /usr/bin/g++
configure:6763: result: g++
configure:6790: checking for C++ compiler version
configure:6799: g++ --version >&5
g++ (GCC) 5.1.0
Copyright (C) 2015 Free Software Foundation, Inc.
This is free software; see the source for copying conditions. There is NO
warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
configure:6810: $? = 0
configure:6799: g++ -v >&5
Using built-in specs.
COLLECT_GCC=g++
COLLECT_LTO_WRAPPER=/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/lto-wrapper
Target: x86_64-unknown-linux-gnu
Configured with: /build/gcc/src/gcc-5-20150519/configure --prefix=/usr --libdir=/usr/lib --libexecdir=/usr/lib --mandir=/usr/share/man --infodir=/usr/share/info --with-bugurl=https://bugs.archlinux.org/ --enable-languages=c,c++,ada,fortran,go,lto,objc,obj-c++ --enable-shared --enable-threads=posix --enable-libmpx --with-system-zlib --with-isl --enable-__cxa_atexit --disable-libunwind-exceptions --enable-clocale=gnu --disable-libstdcxx-pch --disable-libssp --enable-gnu-unique-object --enable-linker-build-id --enable-lto --enable-plugin --enable-install-libiberty --with-linker-hash-style=gnu --enable-gnu-indirect-function --disable-multilib --disable-werror --enable-checking=release --with-default-libstdcxx-abi=c++98
Thread model: posix
gcc version 5.1.0 (GCC)
configure:6810: $? = 0
configure:6799: g++ -V >&5
g++: error: unrecognized command line option '-V'
g++: fatal error: no input files
compilation terminated.
configure:6810: $? = 1
configure:6799: g++ -qversion >&5
g++: error: unrecognized command line option '-qversion'
g++: fatal error: no input files
compilation terminated.
configure:6810: $? = 1
configure:6814: checking whether we are using the GNU C++ compiler
configure:6841: g++ -c conftest.cpp >&5
configure:6841: $? = 0
configure:6850: result: yes
configure:6859: checking whether g++ accepts -g
configure:6887: g++ -c -g conftest.cpp >&5
configure:6887: $? = 0
configure:6944: result: yes
configure:6969: checking dependency style of g++
configure:7080: result: gcc3
configure:7100: checking how to run the C++ preprocessor
configure:7127: g++ -E conftest.cpp
configure:7127: $? = 0
configure:7141: g++ -E conftest.cpp
conftest.cpp:13:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:7141: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> /* end confdefs.h. */
> #include <ac_nonexistent.h>
configure:7166: result: g++ -E
configure:7186: g++ -E conftest.cpp
configure:7186: $? = 0
configure:7200: g++ -E conftest.cpp
conftest.cpp:13:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:7200: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> /* end confdefs.h. */
> #include <ac_nonexistent.h>
configure:7229: checking if c++ interface enabled
configure:7388: result: no
configure:7409: checking if high level library is enabled
configure:7446: checking for perl
configure:7462: found /usr/bin/perl
configure:7473: result: perl
configure:7496: checking for ar
configure:7512: found /usr/bin/ar
configure:7523: result: ar
configure:7542: checking whether make sets $(MAKE)
configure:7564: result: yes
configure:7581: checking for tr
configure:7599: found /usr/bin/tr
configure:7611: result: /usr/bin/tr
configure:7630: checking if srcdir= and time commands work together
configure:7641: result: no
configure:7693: checking if shared Fortran libraries are supported
configure:7727: result: yes
configure:7812: checking how to print strings
configure:7839: result: printf
configure:7860: checking for a sed that does not truncate output
configure:7924: result: /usr/bin/sed
configure:7942: checking for grep that handles long lines and -e
configure:8000: result: /usr/bin/grep
configure:8005: checking for egrep
configure:8067: result: /usr/bin/grep -E
configure:8072: checking for fgrep
configure:8134: result: /usr/bin/grep -F
configure:8169: checking for ld used by gcc
configure:8236: result: /usr/bin/ld
configure:8243: checking if the linker (/usr/bin/ld) is GNU ld
configure:8258: result: yes
configure:8270: checking for BSD- or MS-compatible name lister (nm)
configure:8319: result: /usr/bin/nm -B
configure:8449: checking the name lister (/usr/bin/nm -B) interface
configure:8456: gcc -c conftest.c >&5
configure:8459: /usr/bin/nm -B "conftest.o"
configure:8462: output
0000000000000000 B some_variable
configure:8469: result: BSD nm
configure:8472: checking whether ln -s works
configure:8476: result: yes
configure:8484: checking the maximum length of command line arguments
configure:8614: result: 1572864
configure:8631: checking whether the shell understands some XSI constructs
configure:8641: result: yes
configure:8645: checking whether the shell understands "+="
configure:8651: result: yes
configure:8686: checking how to convert x86_64-pc-none file names to x86_64-pc-none format
configure:8726: result: func_convert_file_noop
configure:8733: checking how to convert x86_64-pc-none file names to toolchain format
configure:8753: result: func_convert_file_noop
configure:8760: checking for /usr/bin/ld option to reload object files
configure:8767: result: -r
configure:8841: checking for objdump
configure:8857: found /usr/bin/objdump
configure:8868: result: objdump
configure:8900: checking how to recognize dependent libraries
configure:9102: result: unknown
configure:9187: checking for dlltool
configure:9217: result: no
configure:9247: checking how to associate runtime and link libraries
configure:9274: result: printf %s\n
configure:9398: checking for archiver @FILE support
configure:9423: gcc -c conftest.c >&5
configure:9423: $? = 0
configure:9426: ar cru libconftest.a @conftest.lst >&5
configure:9429: $? = 0
configure:9434: ar cru libconftest.a @conftest.lst >&5
ar: conftest.o: No such file or directory
configure:9437: $? = 1
configure:9449: result: @
configure:9507: checking for strip
configure:9523: found /usr/bin/strip
configure:9534: result: strip
configure:9606: checking for ranlib
configure:9622: found /usr/bin/ranlib
configure:9633: result: ranlib
configure:9735: checking command to parse /usr/bin/nm -B output from gcc object
configure:9855: gcc -c conftest.c >&5
configure:9858: $? = 0
configure:9862: /usr/bin/nm -B conftest.o \| sed -n -e 's/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p' | sed '/ __gnu_lto/d' \> conftest.nm
configure:9865: $? = 0
configure:9931: gcc -o conftest conftest.c conftstm.o >&5
configure:9934: $? = 0
configure:9972: result: ok
configure:10009: checking for sysroot
configure:10039: result: no
configure:10303: checking for mt
configure:10333: result: no
configure:10353: checking if : is a manifest tool
configure:10359: : '-?'
configure:10367: result: no
configure:11017: checking how to run the C preprocessor
configure:11048: gcc -E conftest.c
configure:11048: $? = 0
configure:11062: gcc -E conftest.c
conftest.c:14:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:11062: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> /* end confdefs.h. */
> #include <ac_nonexistent.h>
configure:11087: result: gcc -E
configure:11107: gcc -E conftest.c
configure:11107: $? = 0
configure:11121: gcc -E conftest.c
conftest.c:14:28: fatal error: ac_nonexistent.h: No such file or directory
compilation terminated.
configure:11121: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> /* end confdefs.h. */
> #include <ac_nonexistent.h>
configure:11150: checking for ANSI C header files
configure:11178: gcc -c conftest.c >&5
configure:11178: $? = 0
configure:11251: gcc -o conftest conftest.c >&5
configure:11251: $? = 0
configure:11251: ./conftest
configure:11251: $? = 0
configure:11262: result: yes
configure:11275: checking for sys/types.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for sys/stat.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for stdlib.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for string.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for memory.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for strings.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for inttypes.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for stdint.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11275: checking for unistd.h
configure:11275: gcc -c conftest.c >&5
configure:11275: $? = 0
configure:11275: result: yes
configure:11289: checking for dlfcn.h
configure:11289: gcc -c conftest.c >&5
configure:11289: $? = 0
configure:11289: result: yes
configure:11504: checking for objdir
configure:11519: result: .libs
configure:11786: checking if gcc supports -fno-rtti -fno-exceptions
configure:11804: gcc -c -fno-rtti -fno-exceptions conftest.c >&5
cc1: warning: command line option '-fno-rtti' is valid for C++/ObjC++ but not for C
configure:11808: $? = 0
configure:11821: result: no
configure:12148: checking for gcc option to produce PIC
configure:12155: result: -fPIC -DPIC
configure:12163: checking if gcc PIC flag -fPIC -DPIC works
configure:12181: gcc -c -fPIC -DPIC -DPIC conftest.c >&5
configure:12185: $? = 0
configure:12198: result: yes
configure:12227: checking if gcc static flag -static works
configure:12255: result: yes
configure:12270: checking if gcc supports -c -o file.o
configure:12291: gcc -c -o out/conftest2.o conftest.c >&5
configure:12295: $? = 0
configure:12317: result: yes
configure:12325: checking if gcc supports -c -o file.o
configure:12372: result: yes
configure:12405: checking whether the gcc linker (/usr/bin/ld) supports shared libraries
configure:13574: result: yes
configure:13611: checking whether -lc should be explicitly linked in
configure:13619: gcc -c conftest.c >&5
configure:13622: $? = 0
configure:13637: gcc -shared -fPIC -DPIC conftest.o -v -Wl,-soname -Wl,conftest -o conftest 2\>\&1 \| /usr/bin/grep -lc \>/dev/null 2\>\&1
configure:13640: $? = 0
configure:13654: result: no
configure:13814: checking dynamic linker characteristics
configure:14555: result: no
configure:14662: checking how to hardcode library paths into programs
configure:14687: result: immediate
configure:14789: checking for shl_load
configure:14789: gcc -o conftest conftest.c >&5
/tmp/cciXRyKJ.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `shl_load'
collect2: error: ld returned 1 exit status
configure:14789: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> /* end confdefs.h. */
> /* Define shl_load to an innocuous variant, in case <limits.h> declares shl_load.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define shl_load innocuous_shl_load
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char shl_load (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef shl_load
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char shl_load ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_shl_load || defined __stub___shl_load
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return shl_load ();
> ;
> return 0;
> }
configure:14789: result: no
configure:14793: checking for shl_load in -ldld
configure:14826: gcc -o conftest conftest.c -ldld >&5
/usr/bin/ld: cannot find -ldld
collect2: error: ld returned 1 exit status
configure:14826: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> /* end confdefs.h. */
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char shl_load ();
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return shl_load ();
> ;
> return 0;
> }
configure:14835: result: no
configure:14840: checking for dlopen
configure:14840: gcc -o conftest conftest.c >&5
/tmp/ccU8m5gO.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `dlopen'
collect2: error: ld returned 1 exit status
configure:14840: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> /* end confdefs.h. */
> /* Define dlopen to an innocuous variant, in case <limits.h> declares dlopen.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define dlopen innocuous_dlopen
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char dlopen (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef dlopen
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char dlopen ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_dlopen || defined __stub___dlopen
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return dlopen ();
> ;
> return 0;
> }
configure:14840: result: no
configure:14844: checking for dlopen in -ldl
configure:14877: gcc -o conftest conftest.c -ldl >&5
configure:14877: $? = 0
configure:14886: result: yes
configure:15021: checking whether a program can dlopen itself
configure:15101: gcc -o conftest -DHAVE_DLFCN_H -Wl,--export-dynamic conftest.c -ldl >&5
configure:15104: $? = 0
configure:15122: result: yes
configure:15127: checking whether a statically linked program can dlopen itself
configure:15207: gcc -o conftest -DHAVE_DLFCN_H -Wl,--export-dynamic -static conftest.c -ldl >&5
/tmp/ccRkAuGS.o: In function `main':
conftest.c:(.text+0x1e): warning: Using 'dlopen' in statically linked applications requires at runtime the shared libraries from the glibc version used for linking
/usr/bin/ld: dynamic STT_GNU_IFUNC symbol `strcmp' with pointer equality in `/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib/libc.a(strcmp.o)' can not be used when making an executable; recompile with -fPIE and relink with -pie
collect2: error: ld returned 1 exit status
configure:15210: $? = 1
configure:15228: result: no
configure:15267: checking whether stripping libraries is possible
configure:15272: result: yes
configure:15307: checking if libtool supports shared libraries
configure:15309: result: no
configure:15312: checking whether to build shared libraries
configure:15333: result: no
configure:15336: checking whether to build static libraries
configure:15340: result: yes
configure:18681: checking if libtool supports shared libraries
configure:18683: result: no
configure:18686: checking whether to build shared libraries
configure:18706: result: no
configure:18709: checking whether to build static libraries
configure:18713: result: yes
configure:18747: gfortran -c -I. conftest.f90 >&5
configure:18750: $? = 0
configure:19179: checking for gfortran option to produce PIC
configure:19186: result: -fPIC
configure:19194: checking if gfortran PIC flag -fPIC works
configure:19212: gfortran -c -I. -fPIC conftest.f90 >&5
configure:19216: $? = 0
configure:19229: result: yes
configure:19252: checking if gfortran static flag -static works
configure:19280: result: no
configure:19292: checking if gfortran supports -c -o file.o
configure:19313: gfortran -c -I. -o out/conftest2.o conftest.f90 >&5
configure:19317: $? = 0
configure:19339: result: yes
configure:19344: checking if gfortran supports -c -o file.o
configure:19391: result: yes
configure:19421: checking whether the gfortran linker (/usr/bin/ld) supports shared libraries
configure:20524: result: yes
configure:20665: checking dynamic linker characteristics
configure:21326: result: no
configure:21379: checking how to hardcode library paths into programs
configure:21404: result: immediate
configure:21462: checking if we should install only statically linked executables
configure:21507: checking if -Wl,-rpath should be used to link shared libs in nondefault directories
configure:21525: result: yes
configure:21544: checking whether make will build with undefined variables
configure:21553: result: yes
configure:21568: checking for production mode
configure:21579: result: production
configure:21618: checking for ceil in -lm
configure:21651: gcc -o conftest conftest.c -lm >&5
conftest.c:33:6: warning: conflicting types for built-in function 'ceil'
char ceil ();
^
configure:21651: $? = 0
configure:21660: result: yes
configure:21671: checking for dlopen in -ldl
configure:21713: result: yes
configure:21838: checking for ANSI C header files
configure:21950: result: yes
configure:21958: checking whether time.h and sys/time.h may both be included
configure:21986: gcc -c conftest.c >&5
configure:21986: $? = 0
configure:21993: result: yes
configure:22006: checking sys/resource.h usability
configure:22006: gcc -c conftest.c >&5
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking sys/resource.h presence
configure:22006: gcc -E conftest.c
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking for sys/resource.h
configure:22006: result: yes
configure:22006: checking sys/time.h usability
configure:22006: gcc -c conftest.c >&5
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking sys/time.h presence
configure:22006: gcc -E conftest.c
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking for sys/time.h
configure:22006: result: yes
configure:22006: checking for unistd.h
configure:22006: result: yes
configure:22006: checking sys/ioctl.h usability
configure:22006: gcc -c conftest.c >&5
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking sys/ioctl.h presence
configure:22006: gcc -E conftest.c
configure:22006: $? = 0
configure:22006: result: yes
configure:22006: checking for sys/ioctl.h
configure:22006: result: yes
configure:22006: checking for sys/stat.h
configure:22006: result: yes
configure:22019: checking sys/socket.h usability
configure:22019: gcc -c conftest.c >&5
configure:22019: $? = 0
configure:22019: result: yes
configure:22019: checking sys/socket.h presence
configure:22019: gcc -E conftest.c
configure:22019: $? = 0
configure:22019: result: yes
configure:22019: checking for sys/socket.h
configure:22019: result: yes
configure:22019: checking for sys/types.h
configure:22019: result: yes
configure:22032: checking stddef.h usability
configure:22032: gcc -c conftest.c >&5
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking stddef.h presence
configure:22032: gcc -E conftest.c
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking for stddef.h
configure:22032: result: yes
configure:22032: checking setjmp.h usability
configure:22032: gcc -c conftest.c >&5
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking setjmp.h presence
configure:22032: gcc -E conftest.c
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking for setjmp.h
configure:22032: result: yes
configure:22032: checking features.h usability
configure:22032: gcc -c conftest.c >&5
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking features.h presence
configure:22032: gcc -E conftest.c
configure:22032: $? = 0
configure:22032: result: yes
configure:22032: checking for features.h
configure:22032: result: yes
configure:22044: checking dirent.h usability
configure:22044: gcc -c conftest.c >&5
configure:22044: $? = 0
configure:22044: result: yes
configure:22044: checking dirent.h presence
configure:22044: gcc -E conftest.c
configure:22044: $? = 0
configure:22044: result: yes
configure:22044: checking for dirent.h
configure:22044: result: yes
configure:22056: checking for stdint.h
configure:22056: result: yes
configure:22070: checking mach/mach_time.h usability
configure:22070: gcc -c conftest.c >&5
conftest.c:75:28: fatal error: mach/mach_time.h: No such file or directory
compilation terminated.
configure:22070: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #include <mach/mach_time.h>
configure:22070: result: no
configure:22070: checking mach/mach_time.h presence
configure:22070: gcc -E conftest.c
conftest.c:42:28: fatal error: mach/mach_time.h: No such file or directory
compilation terminated.
configure:22070: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <mach/mach_time.h>
configure:22070: result: no
configure:22070: checking for mach/mach_time.h
configure:22070: result: no
configure:22173: checking io.h usability
configure:22173: gcc -c conftest.c >&5
conftest.c:75:16: fatal error: io.h: No such file or directory
compilation terminated.
configure:22173: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #include <io.h>
configure:22173: result: no
configure:22173: checking io.h presence
configure:22173: gcc -E conftest.c
conftest.c:42:16: fatal error: io.h: No such file or directory
compilation terminated.
configure:22173: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <io.h>
configure:22173: result: no
configure:22173: checking for io.h
configure:22173: result: no
configure:22173: checking winsock2.h usability
configure:22173: gcc -c conftest.c >&5
conftest.c:75:22: fatal error: winsock2.h: No such file or directory
compilation terminated.
configure:22173: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #include <winsock2.h>
configure:22173: result: no
configure:22173: checking winsock2.h presence
configure:22173: gcc -E conftest.c
conftest.c:42:22: fatal error: winsock2.h: No such file or directory
compilation terminated.
configure:22173: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> /* end confdefs.h. */
> #include <winsock2.h>
configure:22173: result: no
configure:22173: checking for winsock2.h
configure:22173: result: no
configure:22173: checking sys/timeb.h usability
configure:22173: gcc -c conftest.c >&5
configure:22173: $? = 0
configure:22173: result: yes
configure:22173: checking sys/timeb.h presence
configure:22173: gcc -E conftest.c
configure:22173: $? = 0
configure:22173: result: yes
configure:22173: checking for sys/timeb.h
configure:22173: result: yes
configure:22270: checking for _FILE_OFFSET_BITS value needed for large files
configure:22303: gcc -c conftest.c >&5
configure:22303: $? = 0
configure:22343: result: no
configure:22522: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:55:1: error: unknown type name 'off64_t'
off64_t n = 0;
^
configure:22522: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> /* end confdefs.h. */
> #include <sys/types.h>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> off64_t n = 0;
> ;
> return 0;
> }
configure:22536: result: skipping test for lseek64(), fseeko64 , ftello64, ftruncate64() because off64_t is not defined
configure:22543: checking for fseeko
configure:22543: gcc -o conftest conftest.c -ldl -lm >&5
configure:22543: $? = 0
configure:22543: result: yes
configure:22543: checking for ftello
configure:22543: gcc -o conftest conftest.c -ldl -lm >&5
configure:22543: $? = 0
configure:22543: result: yes
configure:22573: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:59:15: error: storage size of 'sb' isn't known
struct stat64 sb;
^
configure:22573: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
>
> #include <sys/types.h>
> #include <sys/stat.h>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> struct stat64 sb;
> ;
> return 0;
> }
configure:22587: result: skipping test for stat64() and fstat64()
configure:22595: checking for off_t
configure:22595: gcc -c conftest.c >&5
configure:22595: $? = 0
configure:22595: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:89:20: error: expected expression before ')' token
if (sizeof ((off_t)))
^
configure:22595: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> if (sizeof ((off_t)))
> return 0;
> ;
> return 0;
> }
configure:22595: result: yes
configure:22606: checking for size_t
configure:22606: gcc -c conftest.c >&5
configure:22606: $? = 0
configure:22606: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:89:21: error: expected expression before ')' token
if (sizeof ((size_t)))
^
configure:22606: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> if (sizeof ((size_t)))
> return 0;
> ;
> return 0;
> }
configure:22606: result: yes
configure:22617: checking for ssize_t
configure:22617: gcc -c conftest.c >&5
configure:22617: $? = 0
configure:22617: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:89:22: error: expected expression before ')' token
if (sizeof ((ssize_t)))
^
configure:22617: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> if (sizeof ((ssize_t)))
> return 0;
> ;
> return 0;
> }
configure:22617: result: yes
configure:22628: checking for ptrdiff_t
configure:22628: gcc -c conftest.c >&5
configure:22628: $? = 0
configure:22628: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:89:24: error: expected expression before ')' token
if (sizeof ((ptrdiff_t)))
^
configure:22628: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> if (sizeof ((ptrdiff_t)))
> return 0;
> ;
> return 0;
> }
configure:22628: result: yes
configure:22639: checking whether byte ordering is bigendian
configure:22654: gcc -c conftest.c >&5
conftest.c:46:9: error: unknown type name 'not'
not a universal capable compiler
^
conftest.c:46:15: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'universal'
not a universal capable compiler
^
conftest.c:46:15: error: unknown type name 'universal'
configure:22654: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #ifndef __APPLE_CC__
> not a universal capable compiler
> #endif
> typedef int dummy;
>
configure:22707: gcc -c conftest.c >&5
configure:22707: $? = 0
configure:22733: gcc -c conftest.c >&5
conftest.c: In function 'main':
conftest.c:60:4: error: unknown type name 'not'
not big endian
^
conftest.c:60:12: error: expected '=', ',', ';', 'asm' or '__attribute__' before 'endian'
not big endian
^
configure:22733: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> /* end confdefs.h. */
> #include <sys/types.h>
> #include <sys/param.h>
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> #if BYTE_ORDER != BIG_ENDIAN
> not big endian
> #endif
>
> ;
> return 0;
> }
configure:22893: result: no
configure:22915: checking size of char
configure:22920: gcc -o conftest conftest.c -ldl -lm >&5
configure:22920: $? = 0
configure:22920: ./conftest
configure:22920: $? = 0
configure:22934: result: 1
configure:22948: checking size of short
configure:22953: gcc -o conftest conftest.c -ldl -lm >&5
configure:22953: $? = 0
configure:22953: ./conftest
configure:22953: $? = 0
configure:22967: result: 2
configure:22981: checking size of int
configure:22986: gcc -o conftest conftest.c -ldl -lm >&5
configure:22986: $? = 0
configure:22986: ./conftest
configure:22986: $? = 0
configure:23000: result: 4
configure:23014: checking size of unsigned
configure:23019: gcc -o conftest conftest.c -ldl -lm >&5
configure:23019: $? = 0
configure:23019: ./conftest
configure:23019: $? = 0
configure:23033: result: 4
configure:23047: checking size of long
configure:23052: gcc -o conftest conftest.c -ldl -lm >&5
configure:23052: $? = 0
configure:23052: ./conftest
configure:23052: $? = 0
configure:23066: result: 8
configure:23080: checking size of long long
configure:23085: gcc -o conftest conftest.c -ldl -lm >&5
configure:23085: $? = 0
configure:23085: ./conftest
configure:23085: $? = 0
configure:23099: result: 8
configure:23113: checking size of __int64
configure:23118: gcc -o conftest conftest.c -ldl -lm >&5
conftest.c: In function 'longval':
conftest.c:84:57: error: '__int64' undeclared (first use in this function)
static long int longval () { return (long int) (sizeof (__int64)); }
^
conftest.c:84:57: note: each undeclared identifier is reported only once for each function it appears in
conftest.c: In function 'ulongval':
conftest.c:85:67: error: '__int64' undeclared (first use in this function)
static unsigned long int ulongval () { return (long int) (sizeof (__int64)); }
^
conftest.c: In function 'main':
conftest.c:103:28: error: '__int64' undeclared (first use in this function)
if (((long int) (sizeof (__int64))) < 0)
^
configure:23118: $? = 1
configure: program exited with status 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> static long int longval () { return (long int) (sizeof (__int64)); }
> static unsigned long int ulongval () { return (long int) (sizeof (__int64)); }
> #include <stdio.h>
> #include <stdlib.h>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
>
> FILE *f = fopen ("conftest.val", "w");
> if (! f)
> return 1;
> if (((long int) (sizeof (__int64))) < 0)
> {
> long int i = longval ();
> if (i != ((long int) (sizeof (__int64))))
> return 1;
> fprintf (f, "%ld", i);
> }
> else
> {
> unsigned long int i = ulongval ();
> if (i != ((long int) (sizeof (__int64))))
> return 1;
> fprintf (f, "%lu", i);
> }
> /* Do not output a trailing newline, as this causes \r\n confusion
> on some platforms. */
> return ferror (f) || fclose (f) != 0;
>
> ;
> return 0;
> }
configure:23132: result: 0
configure:23146: checking size of float
configure:23151: gcc -o conftest conftest.c -ldl -lm >&5
configure:23151: $? = 0
configure:23151: ./conftest
configure:23151: $? = 0
configure:23165: result: 4
configure:23179: checking size of double
configure:23184: gcc -o conftest conftest.c -ldl -lm >&5
configure:23184: $? = 0
configure:23184: ./conftest
configure:23184: $? = 0
configure:23198: result: 8
configure:23212: checking size of long double
configure:23217: gcc -o conftest conftest.c -ldl -lm >&5
configure:23217: $? = 0
configure:23217: ./conftest
configure:23217: $? = 0
configure:23231: result: 16
configure:23344: checking size of int8_t
configure:23349: gcc -o conftest conftest.c -ldl -lm >&5
configure:23349: $? = 0
configure:23349: ./conftest
configure:23349: $? = 0
configure:23363: result: 1
configure:23377: checking size of uint8_t
configure:23382: gcc -o conftest conftest.c -ldl -lm >&5
configure:23382: $? = 0
configure:23382: ./conftest
configure:23382: $? = 0
configure:23396: result: 1
configure:23410: checking size of int_least8_t
configure:23415: gcc -o conftest conftest.c -ldl -lm >&5
configure:23415: $? = 0
configure:23415: ./conftest
configure:23415: $? = 0
configure:23429: result: 1
configure:23443: checking size of uint_least8_t
configure:23448: gcc -o conftest conftest.c -ldl -lm >&5
configure:23448: $? = 0
configure:23448: ./conftest
configure:23448: $? = 0
configure:23462: result: 1
configure:23476: checking size of int_fast8_t
configure:23481: gcc -o conftest conftest.c -ldl -lm >&5
configure:23481: $? = 0
configure:23481: ./conftest
configure:23481: $? = 0
configure:23495: result: 1
configure:23509: checking size of uint_fast8_t
configure:23514: gcc -o conftest conftest.c -ldl -lm >&5
configure:23514: $? = 0
configure:23514: ./conftest
configure:23514: $? = 0
configure:23528: result: 1
configure:23543: checking size of int16_t
configure:23548: gcc -o conftest conftest.c -ldl -lm >&5
configure:23548: $? = 0
configure:23548: ./conftest
configure:23548: $? = 0
configure:23562: result: 2
configure:23576: checking size of uint16_t
configure:23581: gcc -o conftest conftest.c -ldl -lm >&5
configure:23581: $? = 0
configure:23581: ./conftest
configure:23581: $? = 0
configure:23595: result: 2
configure:23609: checking size of int_least16_t
configure:23614: gcc -o conftest conftest.c -ldl -lm >&5
configure:23614: $? = 0
configure:23614: ./conftest
configure:23614: $? = 0
configure:23628: result: 2
configure:23642: checking size of uint_least16_t
configure:23647: gcc -o conftest conftest.c -ldl -lm >&5
configure:23647: $? = 0
configure:23647: ./conftest
configure:23647: $? = 0
configure:23661: result: 2
configure:23675: checking size of int_fast16_t
configure:23680: gcc -o conftest conftest.c -ldl -lm >&5
configure:23680: $? = 0
configure:23680: ./conftest
configure:23680: $? = 0
configure:23694: result: 8
configure:23708: checking size of uint_fast16_t
configure:23713: gcc -o conftest conftest.c -ldl -lm >&5
configure:23713: $? = 0
configure:23713: ./conftest
configure:23713: $? = 0
configure:23727: result: 8
configure:23742: checking size of int32_t
configure:23747: gcc -o conftest conftest.c -ldl -lm >&5
configure:23747: $? = 0
configure:23747: ./conftest
configure:23747: $? = 0
configure:23761: result: 4
configure:23775: checking size of uint32_t
configure:23780: gcc -o conftest conftest.c -ldl -lm >&5
configure:23780: $? = 0
configure:23780: ./conftest
configure:23780: $? = 0
configure:23794: result: 4
configure:23808: checking size of int_least32_t
configure:23813: gcc -o conftest conftest.c -ldl -lm >&5
configure:23813: $? = 0
configure:23813: ./conftest
configure:23813: $? = 0
configure:23827: result: 4
configure:23841: checking size of uint_least32_t
configure:23846: gcc -o conftest conftest.c -ldl -lm >&5
configure:23846: $? = 0
configure:23846: ./conftest
configure:23846: $? = 0
configure:23860: result: 4
configure:23874: checking size of int_fast32_t
configure:23879: gcc -o conftest conftest.c -ldl -lm >&5
configure:23879: $? = 0
configure:23879: ./conftest
configure:23879: $? = 0
configure:23893: result: 8
configure:23907: checking size of uint_fast32_t
configure:23912: gcc -o conftest conftest.c -ldl -lm >&5
configure:23912: $? = 0
configure:23912: ./conftest
configure:23912: $? = 0
configure:23926: result: 8
configure:23941: checking size of int64_t
configure:23946: gcc -o conftest conftest.c -ldl -lm >&5
configure:23946: $? = 0
configure:23946: ./conftest
configure:23946: $? = 0
configure:23960: result: 8
configure:23974: checking size of uint64_t
configure:23979: gcc -o conftest conftest.c -ldl -lm >&5
configure:23979: $? = 0
configure:23979: ./conftest
configure:23979: $? = 0
configure:23993: result: 8
configure:24007: checking size of int_least64_t
configure:24012: gcc -o conftest conftest.c -ldl -lm >&5
configure:24012: $? = 0
configure:24012: ./conftest
configure:24012: $? = 0
configure:24026: result: 8
configure:24040: checking size of uint_least64_t
configure:24045: gcc -o conftest conftest.c -ldl -lm >&5
configure:24045: $? = 0
configure:24045: ./conftest
configure:24045: $? = 0
configure:24059: result: 8
configure:24073: checking size of int_fast64_t
configure:24078: gcc -o conftest conftest.c -ldl -lm >&5
configure:24078: $? = 0
configure:24078: ./conftest
configure:24078: $? = 0
configure:24092: result: 8
configure:24106: checking size of uint_fast64_t
configure:24111: gcc -o conftest conftest.c -ldl -lm >&5
configure:24111: $? = 0
configure:24111: ./conftest
configure:24111: $? = 0
configure:24125: result: 8
configure:24140: checking size of size_t
configure:24145: gcc -o conftest conftest.c -ldl -lm >&5
configure:24145: $? = 0
configure:24145: ./conftest
configure:24145: $? = 0
configure:24159: result: 8
configure:24173: checking size of ssize_t
configure:24178: gcc -o conftest conftest.c -ldl -lm >&5
configure:24178: $? = 0
configure:24178: ./conftest
configure:24178: $? = 0
configure:24192: result: 8
configure:24206: checking size of ptrdiff_t
configure:24211: gcc -o conftest conftest.c -ldl -lm >&5
configure:24211: $? = 0
configure:24211: ./conftest
configure:24211: $? = 0
configure:24225: result: 8
configure:24243: checking size of off_t
configure:24248: gcc -o conftest conftest.c -ldl -lm >&5
configure:24248: $? = 0
configure:24248: ./conftest
configure:24248: $? = 0
configure:24262: result: 8
configure:24276: checking size of off64_t
configure:24281: gcc -o conftest conftest.c -ldl -lm >&5
conftest.c: In function 'longval':
conftest.c:119:57: error: 'off64_t' undeclared (first use in this function)
static long int longval () { return (long int) (sizeof (off64_t)); }
^
conftest.c:119:57: note: each undeclared identifier is reported only once for each function it appears in
conftest.c: In function 'ulongval':
conftest.c:120:67: error: 'off64_t' undeclared (first use in this function)
static unsigned long int ulongval () { return (long int) (sizeof (off64_t)); }
^
conftest.c: In function 'main':
conftest.c:138:28: error: 'off64_t' undeclared (first use in this function)
if (((long int) (sizeof (off64_t))) < 0)
^
configure:24281: $? = 1
configure: program exited with status 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> /* end confdefs.h. */
> #include <stdio.h>
> #ifdef HAVE_SYS_TYPES_H
> # include <sys/types.h>
> #endif
> #ifdef HAVE_SYS_STAT_H
> # include <sys/stat.h>
> #endif
> #ifdef STDC_HEADERS
> # include <stdlib.h>
> # include <stddef.h>
> #else
> # ifdef HAVE_STDLIB_H
> # include <stdlib.h>
> # endif
> #endif
> #ifdef HAVE_STRING_H
> # if !defined STDC_HEADERS && defined HAVE_MEMORY_H
> # include <memory.h>
> # endif
> # include <string.h>
> #endif
> #ifdef HAVE_STRINGS_H
> # include <strings.h>
> #endif
> #ifdef HAVE_INTTYPES_H
> # include <inttypes.h>
> #endif
> #ifdef HAVE_STDINT_H
> # include <stdint.h>
> #endif
> #ifdef HAVE_UNISTD_H
> # include <unistd.h>
> #endif
> static long int longval () { return (long int) (sizeof (off64_t)); }
> static unsigned long int ulongval () { return (long int) (sizeof (off64_t)); }
> #include <stdio.h>
> #include <stdlib.h>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
>
> FILE *f = fopen ("conftest.val", "w");
> if (! f)
> return 1;
> if (((long int) (sizeof (off64_t))) < 0)
> {
> long int i = longval ();
> if (i != ((long int) (sizeof (off64_t))))
> return 1;
> fprintf (f, "%ld", i);
> }
> else
> {
> unsigned long int i = ulongval ();
> if (i != ((long int) (sizeof (off64_t))))
> return 1;
> fprintf (f, "%lu", i);
> }
> /* Do not output a trailing newline, as this causes \r\n confusion
> on some platforms. */
> return ferror (f) || fclose (f) != 0;
>
> ;
> return 0;
> }
configure:24295: result: 0
configure:24396: checking if dev_t is scalar
configure:24421: gcc -c conftest.c >&5
configure:24421: $? = 0
configure:24425: result: yes
configure:24541: checking for dmalloc library
configure:24543: result: suppressed
configure:24791: checking zlib.h usability
configure:24791: gcc -c -I/opt/zlib/include conftest.c >&5
configure:24791: $? = 0
configure:24791: result: yes
configure:24791: checking zlib.h presence
configure:24791: gcc -E -I/opt/zlib/include conftest.c
configure:24791: $? = 0
configure:24791: result: yes
configure:24791: checking for zlib.h
configure:24791: result: yes
configure:24810: checking for compress2 in -lz
configure:24843: gcc -o conftest -I/opt/zlib/include -L/opt/zlib/lib conftest.c -lz -ldl -lm >&5
configure:24843: $? = 0
configure:24852: result: yes
configure:24872: checking for compress2
configure:24872: gcc -o conftest -I/opt/zlib/include -L/opt/zlib/lib conftest.c -lz -ldl -lm >&5
configure:24872: $? = 0
configure:24872: result: yes
configure:25023: checking szlib.h usability
configure:25023: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25023: $? = 0
configure:25023: result: yes
configure:25023: checking szlib.h presence
configure:25023: gcc -E -I/opt/zlib/include -I/opt/szip/include conftest.c
configure:25023: $? = 0
configure:25023: result: yes
configure:25023: checking for szlib.h
configure:25023: result: yes
configure:25042: checking for SZ_BufftoBuffCompress in -lsz
configure:25075: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25075: $? = 0
configure:25084: result: yes
configure:25107: checking for szlib encoder
configure:25145: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c: In function 'main':
conftest.c:100:17: warning: implicit declaration of function 'exit' [-Wimplicit-function-declaration]
exit(0);
^
conftest.c:100:17: warning: incompatible implicit declaration of built-in function 'exit'
conftest.c:100:17: note: include '<stdlib.h>' or provide a declaration of 'exit'
conftest.c:102:17: warning: incompatible implicit declaration of built-in function 'exit'
exit(1);
^
conftest.c:102:17: note: include '<stdlib.h>' or provide a declaration of 'exit'
configure:25145: $? = 0
configure:25145: ./conftest
configure:25145: $? = 0
configure:25163: result: yes
configure:25286: checking for thread safe support
configure:25313: result: no
configure:25611: checking whether CLOCK_MONOTONIC is declared
configure:25611: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25611: $? = 0
configure:25611: result: yes
configure:25626: checking for tm_gmtoff in struct tm
configure:25649: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25649: $? = 0
configure:25653: result: yes
configure:25662: checking for global timezone variable
configure:25692: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25692: $? = 0
configure:25696: result: yes
configure:25711: checking for st_blocks in struct stat
configure:25733: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25733: $? = 0
configure:25737: result: yes
configure:25751: checking for _getvideoconfig
configure:25751: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/ccsNnkS7.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `_getvideoconfig'
collect2: error: ld returned 1 exit status
configure:25751: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> /* end confdefs.h. */
> /* Define _getvideoconfig to an innocuous variant, in case <limits.h> declares _getvideoconfig.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define _getvideoconfig innocuous__getvideoconfig
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char _getvideoconfig (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef _getvideoconfig
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char _getvideoconfig ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub__getvideoconfig || defined __stub____getvideoconfig
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return _getvideoconfig ();
> ;
> return 0;
> }
configure:25751: result: no
configure:25751: checking for gettextinfo
configure:25751: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/cc4i6cWa.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `gettextinfo'
collect2: error: ld returned 1 exit status
configure:25751: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> /* end confdefs.h. */
> /* Define gettextinfo to an innocuous variant, in case <limits.h> declares gettextinfo.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define gettextinfo innocuous_gettextinfo
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char gettextinfo (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef gettextinfo
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char gettextinfo ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_gettextinfo || defined __stub___gettextinfo
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return gettextinfo ();
> ;
> return 0;
> }
configure:25751: result: no
configure:25766: checking for GetConsoleScreenBufferInfo
configure:25766: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/ccSBzVLg.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `GetConsoleScreenBufferInfo'
collect2: error: ld returned 1 exit status
configure:25766: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> /* end confdefs.h. */
> /* Define GetConsoleScreenBufferInfo to an innocuous variant, in case <limits.h> declares GetConsoleScreenBufferInfo.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define GetConsoleScreenBufferInfo innocuous_GetConsoleScreenBufferInfo
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char GetConsoleScreenBufferInfo (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef GetConsoleScreenBufferInfo
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char GetConsoleScreenBufferInfo ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_GetConsoleScreenBufferInfo || defined __stub___GetConsoleScreenBufferInfo
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return GetConsoleScreenBufferInfo ();
> ;
> return 0;
> }
configure:25766: result: no
configure:25780: checking for _scrsize
configure:25780: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/cciTXu0i.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `_scrsize'
collect2: error: ld returned 1 exit status
configure:25780: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> /* end confdefs.h. */
> /* Define _scrsize to an innocuous variant, in case <limits.h> declares _scrsize.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define _scrsize innocuous__scrsize
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char _scrsize (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef _scrsize
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char _scrsize ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub__scrsize || defined __stub____scrsize
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return _scrsize ();
> ;
> return 0;
> }
configure:25780: result: no
configure:25780: checking for ioctl
configure:25780: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25780: $? = 0
configure:25780: result: yes
configure:25790: checking for struct videoconfig
configure:25811: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:110:20: error: storage size of 'w' isn't known
struct videoconfig w; w.numtextcols=0;
^
configure:25811: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> #define HAVE_IOCTL 1
> /* end confdefs.h. */
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> struct videoconfig w; w.numtextcols=0;
> ;
> return 0;
> }
configure:25818: result: no
configure:25823: checking for struct text_info
configure:25844: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
conftest.c: In function 'main':
conftest.c:110:18: error: storage size of 'w' isn't known
struct text_info w; w.screenwidth=0;
^
configure:25844: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> #define HAVE_IOCTL 1
> /* end confdefs.h. */
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> struct text_info w; w.screenwidth=0;
> ;
> return 0;
> }
configure:25851: result: no
configure:25856: checking for TIOCGWINSZ
configure:25877: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25877: $? = 0
configure:25881: result: yes
configure:25889: checking for TIOCGETD
configure:25910: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:25910: $? = 0
configure:25914: result: yes
configure:25928: checking for library containing clock_gettime
configure:25967: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25967: $? = 0
configure:25984: result: none required
configure:25995: checking for alarm
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25995: $? = 0
configure:25995: result: yes
configure:25995: checking for clock_gettime
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25995: $? = 0
configure:25995: result: yes
configure:25995: checking for difftime
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:25995: $? = 0
configure:25995: result: yes
configure:25995: checking for fork
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:126:6: warning: conflicting types for built-in function 'fork'
char fork ();
^
configure:25995: $? = 0
configure:25995: result: yes
configure:25995: checking for frexpf
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:127:6: warning: conflicting types for built-in function 'frexpf'
char frexpf ();
^
configure:25995: $? = 0
configure:25995: result: yes
configure:25995: checking for frexpl
configure:25995: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:128:6: warning: conflicting types for built-in function 'frexpl'
char frexpl ();
^
configure:25995: $? = 0
configure:25995: result: yes
configure:26007: checking for gethostname
configure:26007: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26007: $? = 0
configure:26007: result: yes
configure:26007: checking for getpwuid
configure:26007: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26007: $? = 0
configure:26007: result: yes
configure:26007: checking for getrusage
configure:26007: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26007: $? = 0
configure:26007: result: yes
configure:26007: checking for gettimeofday
configure:26007: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26007: $? = 0
configure:26007: result: yes
configure:26019: checking for lstat
configure:26019: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26019: $? = 0
configure:26019: result: yes
configure:26019: checking for rand_r
configure:26019: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26019: $? = 0
configure:26019: result: yes
configure:26019: checking for random
configure:26019: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26019: $? = 0
configure:26019: result: yes
configure:26019: checking for setsysinfo
configure:26019: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/ccdLPp70.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `setsysinfo'
collect2: error: ld returned 1 exit status
configure:26019: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> #define HAVE_IOCTL 1
> #define HAVE_TIOCGWINSZ 1
> #define HAVE_TIOCGETD 1
> #define HAVE_ALARM 1
> #define HAVE_CLOCK_GETTIME 1
> #define HAVE_DIFFTIME 1
> #define HAVE_FORK 1
> #define HAVE_FREXPF 1
> #define HAVE_FREXPL 1
> #define HAVE_GETHOSTNAME 1
> #define HAVE_GETPWUID 1
> #define HAVE_GETRUSAGE 1
> #define HAVE_GETTIMEOFDAY 1
> #define HAVE_LSTAT 1
> #define HAVE_RAND_R 1
> #define HAVE_RANDOM 1
> /* end confdefs.h. */
> /* Define setsysinfo to an innocuous variant, in case <limits.h> declares setsysinfo.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define setsysinfo innocuous_setsysinfo
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char setsysinfo (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef setsysinfo
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char setsysinfo ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_setsysinfo || defined __stub___setsysinfo
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return setsysinfo ();
> ;
> return 0;
> }
configure:26019: result: no
configure:26031: checking for signal
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26031: $? = 0
configure:26031: result: yes
configure:26031: checking for longjmp
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26031: $? = 0
configure:26031: result: yes
configure:26031: checking for setjmp
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26031: $? = 0
configure:26031: result: yes
configure:26031: checking for siglongjmp
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26031: $? = 0
configure:26031: result: yes
configure:26031: checking for sigsetjmp
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
/tmp/ccPMRaFg.o: In function `main':
conftest.c:(.text+0xa): undefined reference to `sigsetjmp'
collect2: error: ld returned 1 exit status
configure:26031: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> #define HAVE_IOCTL 1
> #define HAVE_TIOCGWINSZ 1
> #define HAVE_TIOCGETD 1
> #define HAVE_ALARM 1
> #define HAVE_CLOCK_GETTIME 1
> #define HAVE_DIFFTIME 1
> #define HAVE_FORK 1
> #define HAVE_FREXPF 1
> #define HAVE_FREXPL 1
> #define HAVE_GETHOSTNAME 1
> #define HAVE_GETPWUID 1
> #define HAVE_GETRUSAGE 1
> #define HAVE_GETTIMEOFDAY 1
> #define HAVE_LSTAT 1
> #define HAVE_RAND_R 1
> #define HAVE_RANDOM 1
> #define HAVE_SIGNAL 1
> #define HAVE_LONGJMP 1
> #define HAVE_SETJMP 1
> #define HAVE_SIGLONGJMP 1
> /* end confdefs.h. */
> /* Define sigsetjmp to an innocuous variant, in case <limits.h> declares sigsetjmp.
> For example, HP-UX 11i <limits.h> declares gettimeofday. */
> #define sigsetjmp innocuous_sigsetjmp
>
> /* System header to define __stub macros and hopefully few prototypes,
> which can conflict with char sigsetjmp (); below.
> Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
> <limits.h> exists even on freestanding compilers. */
>
> #ifdef __STDC__
> # include <limits.h>
> #else
> # include <assert.h>
> #endif
>
> #undef sigsetjmp
>
> /* Override any GCC internal prototype to avoid an error.
> Use char because int might match the return type of a GCC
> builtin and then its argument prototype would still apply. */
> #ifdef __cplusplus
> extern "C"
> #endif
> char sigsetjmp ();
> /* The GNU C library defines this for functions which it implements
> to always fail with ENOSYS. Some functions are actually named
> something starting with __ and the normal name is an alias. */
> #if defined __stub_sigsetjmp || defined __stub___sigsetjmp
> choke me
> #endif
>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> return sigsetjmp ();
> ;
> return 0;
> }
configure:26031: result: no
configure:26031: checking for sigprocmask
configure:26031: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26031: $? = 0
configure:26031: result: yes
configure:26043: checking for snprintf
configure:26043: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:141:6: warning: conflicting types for built-in function 'snprintf'
char snprintf ();
^
configure:26043: $? = 0
configure:26043: result: yes
configure:26043: checking for srandom
configure:26043: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26043: $? = 0
configure:26043: result: yes
configure:26043: checking for strdup
configure:26043: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:143:6: warning: conflicting types for built-in function 'strdup'
char strdup ();
^
configure:26043: $? = 0
configure:26043: result: yes
configure:26043: checking for symlink
configure:26043: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26043: $? = 0
configure:26043: result: yes
configure:26043: checking for system
configure:26043: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26043: $? = 0
configure:26043: result: yes
configure:26055: checking for tmpfile
configure:26055: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26055: $? = 0
configure:26055: result: yes
configure:26055: checking for asprintf
configure:26055: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26055: $? = 0
configure:26055: result: yes
configure:26055: checking for vasprintf
configure:26055: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26055: $? = 0
configure:26055: result: yes
configure:26055: checking for vsnprintf
configure:26055: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:149:6: warning: conflicting types for built-in function 'vsnprintf'
char vsnprintf ();
^
configure:26055: $? = 0
configure:26055: result: yes
configure:26055: checking for waitpid
configure:26055: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26055: $? = 0
configure:26055: result: yes
configure:26068: checking for an ANSI C-conforming const
configure:26142: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26142: $? = 0
configure:26149: result: yes
configure:26157: checking for inline
configure:26173: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26173: $? = 0
configure:26181: result: inline
configure:26200: checking for __attribute__ extension
configure:26221: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26221: $? = 0
configure:26225: result: yes
configure:26233: checking for __func__ extension
configure:26254: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26254: $? = 0
configure:26258: result: yes
configure:26265: checking for __FUNCTION__ extension
configure:26286: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26286: $? = 0
configure:26290: result: yes
configure:26297: checking for C99 designated initialization support
configure:26326: gcc -c -I/opt/zlib/include -I/opt/szip/include conftest.c >&5
configure:26326: $? = 0
configure:26330: result: yes
configure:26343: checking how to print long long
configure:26370: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26370: $? = 0
configure:26370: ./conftest
configure:26370: $? = 0
configure:26381: result: %ld and %lu
configure:26393: checking Threads support system scope
configure:26423: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
configure:26423: $? = 0
configure:26423: ./conftest
configure:26423: $? = 0
configure:26439: result: yes
configure:26450: checking for debug flags
configure:26483: result: none
configure:26503: checking whether function stack tracking is enabled
configure:26522: result: no
configure:26530: checking whether metadata trace file code is enabled
configure:26549: result: no
configure:26559: checking for API tracing
configure:26584: result: no
configure:26596: checking for instrumented library
configure:26623: result: no
configure:26634: checking whether to clear file buffers
configure:26645: result: yes
configure:26665: checking whether a memory checking tool will be used
configure:26684: result: no
configure:26803: checking for parallel support files
configure:26815: result: provided by compiler
configure:26820: checking whether a simple MPI-IO C program can be linked
configure:26842: gcc -o conftest -I/opt/zlib/include -I/opt/szip/include -L/opt/zlib/lib -L/opt/szip/lib conftest.c -lsz -lz -ldl -lm >&5
conftest.c:135:17: fatal error: mpi.h: No such file or directory
compilation terminated.
configure:26842: $? = 1
configure: failed program was:
> /* confdefs.h */
> #define PACKAGE_NAME "HDF5"
> #define PACKAGE_TARNAME "hdf5"
> #define PACKAGE_VERSION "1.8.15"
> #define PACKAGE_STRING "HDF5 1.8.15"
> #define PACKAGE_BUGREPORT "help@hdfgroup.org"
> #define PACKAGE_URL ""
> #define PACKAGE "hdf5"
> #define VERSION "1.8.15"
> #define FC_FUNC(name,NAME) name ## _
> #define FC_FUNC_(name,NAME) name ## _
> #define INCLUDE_HL 1
> #define STDC_HEADERS 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_STDLIB_H 1
> #define HAVE_STRING_H 1
> #define HAVE_MEMORY_H 1
> #define HAVE_STRINGS_H 1
> #define HAVE_INTTYPES_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_DLFCN_H 1
> #define LT_OBJDIR ".libs/"
> #define HAVE_LIBM 1
> #define HAVE_LIBDL 1
> #define STDC_HEADERS 1
> #define TIME_WITH_SYS_TIME 1
> #define HAVE_SYS_RESOURCE_H 1
> #define HAVE_SYS_TIME_H 1
> #define HAVE_UNISTD_H 1
> #define HAVE_SYS_IOCTL_H 1
> #define HAVE_SYS_STAT_H 1
> #define HAVE_SYS_SOCKET_H 1
> #define HAVE_SYS_TYPES_H 1
> #define HAVE_STDDEF_H 1
> #define HAVE_SETJMP_H 1
> #define HAVE_FEATURES_H 1
> #define HAVE_DIRENT_H 1
> #define HAVE_STDINT_H 1
> #define HAVE_SYS_TIMEB_H 1
> #define HAVE_FSEEKO 1
> #define HAVE_FTELLO 1
> #define SIZEOF_CHAR 1
> #define SIZEOF_SHORT 2
> #define SIZEOF_INT 4
> #define SIZEOF_UNSIGNED 4
> #define SIZEOF_LONG 8
> #define SIZEOF_LONG_LONG 8
> #define SIZEOF___INT64 0
> #define SIZEOF_FLOAT 4
> #define SIZEOF_DOUBLE 8
> #define SIZEOF_LONG_DOUBLE 16
> #include <sys/types.h>
> #include <stdint.h>
> #define SIZEOF_INT8_T 1
> #define SIZEOF_UINT8_T 1
> #define SIZEOF_INT_LEAST8_T 1
> #define SIZEOF_UINT_LEAST8_T 1
> #define SIZEOF_INT_FAST8_T 1
> #define SIZEOF_UINT_FAST8_T 1
> #define SIZEOF_INT16_T 2
> #define SIZEOF_UINT16_T 2
> #define SIZEOF_INT_LEAST16_T 2
> #define SIZEOF_UINT_LEAST16_T 2
> #define SIZEOF_INT_FAST16_T 8
> #define SIZEOF_UINT_FAST16_T 8
> #define SIZEOF_INT32_T 4
> #define SIZEOF_UINT32_T 4
> #define SIZEOF_INT_LEAST32_T 4
> #define SIZEOF_UINT_LEAST32_T 4
> #define SIZEOF_INT_FAST32_T 8
> #define SIZEOF_UINT_FAST32_T 8
> #define SIZEOF_INT64_T 8
> #define SIZEOF_UINT64_T 8
> #define SIZEOF_INT_LEAST64_T 8
> #define SIZEOF_UINT_LEAST64_T 8
> #define SIZEOF_INT_FAST64_T 8
> #define SIZEOF_UINT_FAST64_T 8
> #define SIZEOF_SIZE_T 8
> #define SIZEOF_SSIZE_T 8
> #define SIZEOF_PTRDIFF_T 8
> #include <sys/types.h> /*for off_t definition*/
> #define SIZEOF_OFF_T 8
> #define SIZEOF_OFF64_T 0
> #define DEV_T_IS_SCALAR 1
> #define HAVE_ZLIB_H 1
> #define HAVE_LIBZ 1
> #define HAVE_FILTER_DEFLATE 1
> #define HAVE_SZLIB_H 1
> #define HAVE_LIBSZ 1
> #define HAVE_FILTER_SZIP 1
> #define HAVE_TM_GMTOFF 1
> #define HAVE_TIMEZONE 1
> #define HAVE_STAT_ST_BLOCKS 1
> #define HAVE_IOCTL 1
> #define HAVE_TIOCGWINSZ 1
> #define HAVE_TIOCGETD 1
> #define HAVE_ALARM 1
> #define HAVE_CLOCK_GETTIME 1
> #define HAVE_DIFFTIME 1
> #define HAVE_FORK 1
> #define HAVE_FREXPF 1
> #define HAVE_FREXPL 1
> #define HAVE_GETHOSTNAME 1
> #define HAVE_GETPWUID 1
> #define HAVE_GETRUSAGE 1
> #define HAVE_GETTIMEOFDAY 1
> #define HAVE_LSTAT 1
> #define HAVE_RAND_R 1
> #define HAVE_RANDOM 1
> #define HAVE_SIGNAL 1
> #define HAVE_LONGJMP 1
> #define HAVE_SETJMP 1
> #define HAVE_SIGLONGJMP 1
> #define HAVE_SIGPROCMASK 1
> #define HAVE_SNPRINTF 1
> #define HAVE_SRANDOM 1
> #define HAVE_STRDUP 1
> #define HAVE_SYMLINK 1
> #define HAVE_SYSTEM 1
> #define HAVE_TMPFILE 1
> #define HAVE_ASPRINTF 1
> #define HAVE_VASPRINTF 1
> #define HAVE_VSNPRINTF 1
> #define HAVE_WAITPID 1
> #define HAVE_ATTRIBUTE 1
> #define HAVE_C99_FUNC 1
> #define HAVE_FUNCTION 1
> #define HAVE_C99_DESIGNATED_INITIALIZER 1
> #define PRINTF_LL_WIDTH "l"
> #define SYSTEM_SCOPE_THREADS 1
> #define CLEAR_MEMORY 1
> /* end confdefs.h. */
> #include <mpi.h>
> #ifdef FC_DUMMY_MAIN
> #ifndef FC_DUMMY_MAIN_EQ_F77
> # ifdef __cplusplus
> extern "C"
> # endif
> int FC_DUMMY_MAIN() { return 1; }
> #endif
> #endif
> int
> main ()
> {
> MPI_Init(0, (void *)0);
> MPI_File_open(0, (void *)0, 0, 0, (void *)0);
> ;
> return 0;
> }
configure:26846: result: no
configure:26848: error: unable to link a simple MPI-IO C program
## ---------------- ##
## Cache variables. ##
## ---------------- ##
ac_cv_build=x86_64-pc-none
ac_cv_c_bigendian=no
ac_cv_c_compiler_gnu=yes
ac_cv_c_const=yes
ac_cv_c_inline=inline
ac_cv_cxx_compiler_gnu=yes
ac_cv_env_CCC_set=
ac_cv_env_CCC_value=
ac_cv_env_CC_set=
ac_cv_env_CC_value=
ac_cv_env_CFLAGS_set=
ac_cv_env_CFLAGS_value=
ac_cv_env_CPPFLAGS_set=
ac_cv_env_CPPFLAGS_value=
ac_cv_env_CPP_set=
ac_cv_env_CPP_value=
ac_cv_env_CXXCPP_set=
ac_cv_env_CXXCPP_value=
ac_cv_env_CXXFLAGS_set=
ac_cv_env_CXXFLAGS_value=
ac_cv_env_CXX_set=
ac_cv_env_CXX_value=
ac_cv_env_FCFLAGS_set=
ac_cv_env_FCFLAGS_value=
ac_cv_env_FC_set=
ac_cv_env_FC_value=
ac_cv_env_LDFLAGS_set=
ac_cv_env_LDFLAGS_value=
ac_cv_env_LIBS_set=
ac_cv_env_LIBS_value=
ac_cv_env_build_alias_set=set
ac_cv_env_build_alias_value=x86_64
ac_cv_env_host_alias_set=
ac_cv_env_host_alias_value=
ac_cv_env_target_alias_set=
ac_cv_env_target_alias_value=
ac_cv_fc_compiler_gnu=yes
ac_cv_fc_dummy_main=none
ac_cv_fc_libs=' -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath'
ac_cv_fc_mangling='lower case, underscore, no extra underscore'
ac_cv_fc_srcext_f90=none
ac_cv_fortran_dummy_main=none
ac_cv_func_GetConsoleScreenBufferInfo=no
ac_cv_func__getvideoconfig=no
ac_cv_func__scrsize=no
ac_cv_func_alarm=yes
ac_cv_func_asprintf=yes
ac_cv_func_clock_gettime=yes
ac_cv_func_compress2=yes
ac_cv_func_difftime=yes
ac_cv_func_dlopen=no
ac_cv_func_fork=yes
ac_cv_func_frexpf=yes
ac_cv_func_frexpl=yes
ac_cv_func_fseeko=yes
ac_cv_func_ftello=yes
ac_cv_func_gethostname=yes
ac_cv_func_getpwuid=yes
ac_cv_func_getrusage=yes
ac_cv_func_gettextinfo=no
ac_cv_func_gettimeofday=yes
ac_cv_func_ioctl=yes
ac_cv_func_longjmp=yes
ac_cv_func_lstat=yes
ac_cv_func_rand_r=yes
ac_cv_func_random=yes
ac_cv_func_setjmp=yes
ac_cv_func_setsysinfo=no
ac_cv_func_shl_load=no
ac_cv_func_siglongjmp=yes
ac_cv_func_signal=yes
ac_cv_func_sigprocmask=yes
ac_cv_func_sigsetjmp=no
ac_cv_func_snprintf=yes
ac_cv_func_srandom=yes
ac_cv_func_strdup=yes
ac_cv_func_symlink=yes
ac_cv_func_system=yes
ac_cv_func_tmpfile=yes
ac_cv_func_vasprintf=yes
ac_cv_func_vsnprintf=yes
ac_cv_func_waitpid=yes
ac_cv_have_decl_CLOCK_MONOTONIC=yes
ac_cv_header_dirent_h=yes
ac_cv_header_dlfcn_h=yes
ac_cv_header_features_h=yes
ac_cv_header_inttypes_h=yes
ac_cv_header_io_h=no
ac_cv_header_mach_mach_time_h=no
ac_cv_header_memory_h=yes
ac_cv_header_setjmp_h=yes
ac_cv_header_stdc=yes
ac_cv_header_stddef_h=yes
ac_cv_header_stdint_h=yes
ac_cv_header_stdlib_h=yes
ac_cv_header_string_h=yes
ac_cv_header_strings_h=yes
ac_cv_header_sys_ioctl_h=yes
ac_cv_header_sys_resource_h=yes
ac_cv_header_sys_socket_h=yes
ac_cv_header_sys_stat_h=yes
ac_cv_header_sys_time_h=yes
ac_cv_header_sys_timeb_h=yes
ac_cv_header_sys_types_h=yes
ac_cv_header_szlib_h=yes
ac_cv_header_time=yes
ac_cv_header_unistd_h=yes
ac_cv_header_winsock2_h=no
ac_cv_header_zlib_h=yes
ac_cv_host=x86_64-pc-none
ac_cv_lib_dl_dlopen=yes
ac_cv_lib_dld_shl_load=no
ac_cv_lib_m_ceil=yes
ac_cv_lib_sz_SZ_BufftoBuffCompress=yes
ac_cv_lib_z_compress2=yes
ac_cv_objext=o
ac_cv_path_EGREP='/usr/bin/grep -E'
ac_cv_path_FGREP='/usr/bin/grep -F'
ac_cv_path_GREP=/usr/bin/grep
ac_cv_path_SED=/usr/bin/sed
ac_cv_path_TR=/usr/bin/tr
ac_cv_path_install='/usr/bin/install -c'
ac_cv_path_mkdir=/usr/bin/mkdir
ac_cv_prog_AR=ar
ac_cv_prog_AWK=gawk
ac_cv_prog_CPP='gcc -E'
ac_cv_prog_CXXCPP='g++ -E'
ac_cv_prog_PERL=perl
ac_cv_prog_ac_ct_CC=gcc
ac_cv_prog_ac_ct_CXX=g++
ac_cv_prog_ac_ct_FC=gfortran
ac_cv_prog_ac_ct_OBJDUMP=objdump
ac_cv_prog_ac_ct_RANLIB=ranlib
ac_cv_prog_ac_ct_STRIP=strip
ac_cv_prog_cc_c89=
ac_cv_prog_cc_g=yes
ac_cv_prog_cxx_g=yes
ac_cv_prog_fc_g=yes
ac_cv_prog_fc_v=-v
ac_cv_prog_make_make_set=yes
ac_cv_search_clock_gettime='none required'
ac_cv_sizeof___int64=0
ac_cv_sizeof_char=1
ac_cv_sizeof_double=8
ac_cv_sizeof_float=4
ac_cv_sizeof_int16_t=2
ac_cv_sizeof_int32_t=4
ac_cv_sizeof_int64_t=8
ac_cv_sizeof_int8_t=1
ac_cv_sizeof_int=4
ac_cv_sizeof_int_fast16_t=8
ac_cv_sizeof_int_fast32_t=8
ac_cv_sizeof_int_fast64_t=8
ac_cv_sizeof_int_fast8_t=1
ac_cv_sizeof_int_least16_t=2
ac_cv_sizeof_int_least32_t=4
ac_cv_sizeof_int_least64_t=8
ac_cv_sizeof_int_least8_t=1
ac_cv_sizeof_long=8
ac_cv_sizeof_long_double=16
ac_cv_sizeof_long_long=8
ac_cv_sizeof_off64_t=0
ac_cv_sizeof_off_t=8
ac_cv_sizeof_ptrdiff_t=8
ac_cv_sizeof_short=2
ac_cv_sizeof_size_t=8
ac_cv_sizeof_ssize_t=8
ac_cv_sizeof_uint16_t=2
ac_cv_sizeof_uint32_t=4
ac_cv_sizeof_uint64_t=8
ac_cv_sizeof_uint8_t=1
ac_cv_sizeof_uint_fast16_t=8
ac_cv_sizeof_uint_fast32_t=8
ac_cv_sizeof_uint_fast64_t=8
ac_cv_sizeof_uint_fast8_t=1
ac_cv_sizeof_uint_least16_t=2
ac_cv_sizeof_uint_least32_t=4
ac_cv_sizeof_uint_least64_t=8
ac_cv_sizeof_uint_least8_t=1
ac_cv_sizeof_unsigned=4
ac_cv_sys_file_offset_bits=no
ac_cv_type_off_t=yes
ac_cv_type_ptrdiff_t=yes
ac_cv_type_size_t=yes
ac_cv_type_ssize_t=yes
am_cv_CC_dependencies_compiler_type=gcc3
am_cv_CXX_dependencies_compiler_type=gcc3
am_cv_make_support_nested_variables=yes
am_cv_prog_cc_c_o=yes
hdf5_cv_host=x86_64-pc-none
hdf5_cv_printf_ll=l
hdf5_cv_system_scope_threads=yes
hdf5_cv_szlib_can_encode=yes
lt_cv_ar_at_file=@
lt_cv_archive_cmds_need_lc=no
lt_cv_deplibs_check_method=unknown
lt_cv_dlopen=dlopen
lt_cv_dlopen_libs=-ldl
lt_cv_dlopen_self=yes
lt_cv_dlopen_self_static=no
lt_cv_file_magic_cmd='$MAGIC_CMD'
lt_cv_file_magic_test_file=
lt_cv_ld_reload_flag=-r
lt_cv_nm_interface='BSD nm'
lt_cv_objdir=.libs
lt_cv_path_LD=/usr/bin/ld
lt_cv_path_NM='/usr/bin/nm -B'
lt_cv_path_mainfest_tool=no
lt_cv_prog_compiler_c_o=yes
lt_cv_prog_compiler_c_o_FC=yes
lt_cv_prog_compiler_pic='-fPIC -DPIC'
lt_cv_prog_compiler_pic_FC=-fPIC
lt_cv_prog_compiler_pic_works=yes
lt_cv_prog_compiler_pic_works_FC=yes
lt_cv_prog_compiler_rtti_exceptions=no
lt_cv_prog_compiler_static_works=yes
lt_cv_prog_compiler_static_works_FC=no
lt_cv_prog_gnu_ld=yes
lt_cv_sharedlib_from_linklib_cmd='printf %s\n'
lt_cv_sys_global_symbol_pipe='sed -n -e '\''s/^.*[ ]\([ABCDGIRSTW][ABCDGIRSTW]*\)[ ][ ]*\([_A-Za-z][_A-Za-z0-9]*\)$/\1 \2 \2/p'\'' | sed '\''/ __gnu_lto/d'\'''
lt_cv_sys_global_symbol_to_c_name_address='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_c_name_address_lib_prefix='sed -n -e '\''s/^: \([^ ]*\)[ ]*$/ {\"\1\", (void *) 0},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \(lib[^ ]*\)$/ {"\2", (void *) \&\2},/p'\'' -e '\''s/^[ABCDGIRSTW]* \([^ ]*\) \([^ ]*\)$/ {"lib\2", (void *) \&\2},/p'\'''
lt_cv_sys_global_symbol_to_cdecl='sed -n -e '\''s/^T .* \(.*\)$/extern int \1();/p'\'' -e '\''s/^[ABCDGIRSTW]* .* \(.*\)$/extern char \1;/p'\'''
lt_cv_sys_max_cmd_len=1572864
lt_cv_to_host_file_cmd=func_convert_file_noop
lt_cv_to_tool_file_cmd=func_convert_file_noop
## ----------------- ##
## Output variables. ##
## ----------------- ##
ACLOCAL='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/missing aclocal-1.14'
ADD_PARALLEL_FILES=''
AMDEPBACKSLASH='\'
AMDEP_FALSE='#'
AMDEP_TRUE=''
AMTAR='$${TAR-tar}'
AM_BACKSLASH='\'
AM_CFLAGS=''
AM_CPPFLAGS=' -I/opt/zlib/include -I/opt/szip/include'
AM_CXXFLAGS=''
AM_DEFAULT_V='$(AM_DEFAULT_VERBOSITY)'
AM_DEFAULT_VERBOSITY='0'
AM_FCFLAGS=''
AM_LDFLAGS=' -L/opt/zlib/lib -L/opt/szip/lib'
AM_MAKEFLAGS=''
AM_V='$(V)'
AR='ar'
AUTOCONF='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/missing autoconf'
AUTOHEADER='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/missing autoheader'
AUTOMAKE='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/missing automake-1.14'
AWK='gawk'
BUILD_ALL_CONDITIONAL_FALSE=''
BUILD_ALL_CONDITIONAL_TRUE=''
BUILD_CXX_CONDITIONAL_FALSE=''
BUILD_CXX_CONDITIONAL_TRUE=''
BUILD_FORTRAN_CONDITIONAL_FALSE=''
BUILD_FORTRAN_CONDITIONAL_TRUE=''
BUILD_HDF5_HL_CONDITIONAL_FALSE=''
BUILD_HDF5_HL_CONDITIONAL_TRUE=''
BUILD_PARALLEL_CONDITIONAL_FALSE=''
BUILD_PARALLEL_CONDITIONAL_TRUE=''
BUILD_SHARED_SZIP_CONDITIONAL_FALSE='#'
BUILD_SHARED_SZIP_CONDITIONAL_TRUE=''
BYTESEX=''
CC='gcc'
CCDEPMODE='depmode=gcc3'
CC_VERSION=''
CFLAGS=' '
CLEARFILEBUF='yes'
CODESTACK='no'
CONFIG_DATE=''
CONFIG_MODE='production'
CONFIG_USER=''
CPP='gcc -E'
CPPFLAGS=' -I/opt/zlib/include -I/opt/szip/include'
CXX='no'
CXXCPP='g++ -E'
CXXDEPMODE='depmode=gcc3'
CXXFLAGS=' '
CXX_VERSION=''
CYGPATH_W='echo'
DEBUG_PKG=''
DEFAULT_API_VERSION=''
DEFS=''
DEPDIR='.deps'
DEPRECATED_SYMBOLS=''
DIRECT_VFD='no'
DIRECT_VFD_CONDITIONAL_FALSE=''
DIRECT_VFD_CONDITIONAL_TRUE=''
DLLTOOL='false'
DSYMUTIL=''
DUMPBIN=''
ECHO_C=''
ECHO_N='-n'
ECHO_T=''
EGREP='/usr/bin/grep -E'
EXEEXT=''
EXTERNAL_FILTERS='deflate(zlib),szip(encoder)'
F9XMODEXT='mod'
F9XMODFLAG='-I'
F9XSUFFIXFLAG=''
FC2003=''
FC='gfortran'
FCFLAGS='-I. '
FCFLAGS_f90=''
FCLIBS=' -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0 -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../../../lib -L/lib/../lib -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-unknown-linux-gnu/5.1.0/../../.. -lgfortran -lm -lquadmath'
FC_VERSION=''
FGREP='/usr/bin/grep -F'
FORTRAN_2003_CONDITIONAL_F_FALSE='#'
FORTRAN_2003_CONDITIONAL_F_TRUE=''
FORTRAN_DEFAULT_REALisDBLE_F_FALSE=''
FORTRAN_DEFAULT_REALisDBLE_F_TRUE='#'
FORTRAN_HAVE_C_SIZEOF_FALSE='#'
FORTRAN_HAVE_C_SIZEOF_TRUE=''
FORTRAN_HAVE_SIZEOF_FALSE='#'
FORTRAN_HAVE_SIZEOF_TRUE=''
FORTRAN_HAVE_STORAGE_SIZE_FALSE='#'
FORTRAN_HAVE_STORAGE_SIZE_TRUE=''
FORTRAN_SHARED_CONDITIONAL_FALSE='#'
FORTRAN_SHARED_CONDITIONAL_TRUE=''
FSEARCH_DIRS=''
GREP='/usr/bin/grep'
H5_CFLAGS=' '
H5_CPPFLAGS=' -DNDEBUG -UH5_DEBUG_API'
H5_CXXFLAGS=' '
H5_FCFLAGS=' '
H5_FORTRAN_SHARED='yes'
H5_LDFLAGS=''
H5_VERSION=''
HADDR_T=''
HAVE_DMALLOC='no'
HAVE_FORTRAN_2003='yes'
HAVE_PTHREAD=''
HAVE_SHARED_CONDITIONAL_FALSE=''
HAVE_SHARED_CONDITIONAL_TRUE=''
HDF5_HL='yes'
HDF5_INTERFACES=' fortran'
HDF_CXX='no'
HDF_FORTRAN2003='yes'
HDF_FORTRAN='yes'
HID_T=''
HL='hl'
HL_FOR=''
HSIZE_T=''
HSSIZE_T=''
INSTALL_DATA='${INSTALL} -m 644'
INSTALL_PROGRAM='${INSTALL}'
INSTALL_SCRIPT='${INSTALL}'
INSTALL_STRIP_PROGRAM='$(install_sh) -c -s'
INSTRUMENT='no'
INSTRUMENT_LIBRARY='no'
LD='/usr/bin/ld'
LDFLAGS=' -L/opt/zlib/lib -L/opt/szip/lib'
LIBOBJS=''
LIBS='-lsz -lz -ldl -lm '
LIBTOOL='$(SHELL) $(top_builddir)/libtool'
LIPO=''
LL_PATH='/opt/szip/lib'
LN_S='ln -s'
LTLIBOBJS=''
LT_STATIC_EXEC=''
MAINT='#'
MAINTAINER_MODE_FALSE=''
MAINTAINER_MODE_TRUE='#'
MAKEINFO='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/missing makeinfo'
MANIFEST_TOOL=':'
MKDIR_P='/usr/bin/mkdir -p'
MPE='no'
NM='/usr/bin/nm -B'
NMEDIT=''
OBJDUMP='objdump'
OBJECT_NAMELEN_DEFAULT_F=''
OBJEXT='o'
OTOOL64=''
OTOOL=''
PACKAGE='hdf5'
PACKAGE_BUGREPORT='help@hdfgroup.org'
PACKAGE_NAME='HDF5'
PACKAGE_STRING='HDF5 1.8.15'
PACKAGE_TARNAME='hdf5'
PACKAGE_URL=''
PACKAGE_VERSION='1.8.15'
PARALLEL='yes'
PATH_SEPARATOR=':'
PERL='perl'
RANLIB='ranlib'
ROOT=''
RUNPARALLEL=''
RUNSERIAL=''
R_INTEGER=''
R_LARGE=''
SEARCH=''
SED='/usr/bin/sed'
SET_MAKE=''
SHELL='/bin/sh'
SIZE_T=''
STATIC_EXEC='no'
STATIC_SHARED=''
STRICT_FORMAT_CHECKS=''
STRIP='strip'
TESTPARALLEL=''
THREADSAFE='no'
TIME=''
TR='/usr/bin/tr'
TRACE_API='no'
UNAME_INFO='Linux turing 4.0.4-2-ARCH #1 SMP PREEMPT Fri May 22 03:05:23 UTC 2015 x86_64 GNU/Linux'
USE_FILTER_DEFLATE='yes'
USE_FILTER_SZIP='yes'
USE_PLUGINS_CONDITIONAL_FALSE='#'
USE_PLUGINS_CONDITIONAL_TRUE=''
USINGMEMCHECKER='no'
VERSION='1.8.15'
WORDS_BIGENDIAN=''
ac_ct_AR=''
ac_ct_CC='gcc'
ac_ct_CXX='g++'
ac_ct_DUMPBIN=''
ac_ct_FC='gfortran'
am__EXEEXT_FALSE=''
am__EXEEXT_TRUE=''
am__fastdepCC_FALSE='#'
am__fastdepCC_TRUE=''
am__fastdepCXX_FALSE='#'
am__fastdepCXX_TRUE=''
am__include='include'
am__isrc=''
am__leading_dot='.'
am__nodep='_no'
am__quote=''
am__tar='$${TAR-tar} chof - "$$tardir"'
am__untar='$${TAR-tar} xf -'
bindir='${exec_prefix}/bin'
build='x86_64-pc-none'
build_alias='x86_64'
build_cpu='x86_64'
build_os='none'
build_vendor='pc'
datadir='${datarootdir}'
datarootdir='${prefix}/share'
docdir='${datarootdir}/doc/${PACKAGE_TARNAME}'
dvidir='${docdir}'
enable_shared='no'
enable_static='yes'
exec_prefix='NONE'
host='x86_64-pc-none'
host_alias=''
host_cpu='x86_64'
host_os='none'
host_vendor='pc'
htmldir='${docdir}'
includedir='${prefix}/include'
infodir='${datarootdir}/info'
install_sh='${SHELL} /home/mabalenk/install/hdf5/hdf5-1.8.15/bin/install-sh'
libdir='${exec_prefix}/lib'
libexecdir='${exec_prefix}/libexec'
localedir='${datarootdir}/locale'
localstatedir='${prefix}/var'
mandir='${datarootdir}/man'
mkdir_p='$(MKDIR_P)'
oldincludedir='/usr/include'
pdfdir='${docdir}'
prefix='/opt/hdf5'
program_transform_name='s,x,x,'
psdir='${docdir}'
sbindir='${exec_prefix}/sbin'
sharedstatedir='${prefix}/com'
sysconfdir='${prefix}/etc'
target_alias=''
## ----------- ##
## confdefs.h. ##
## ----------- ##
/* confdefs.h */
#define PACKAGE_NAME "HDF5"
#define PACKAGE_TARNAME "hdf5"
#define PACKAGE_VERSION "1.8.15"
#define PACKAGE_STRING "HDF5 1.8.15"
#define PACKAGE_BUGREPORT "help@hdfgroup.org"
#define PACKAGE_URL ""
#define PACKAGE "hdf5"
#define VERSION "1.8.15"
#define FC_FUNC(name,NAME) name ## _
#define FC_FUNC_(name,NAME) name ## _
#define INCLUDE_HL 1
#define STDC_HEADERS 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_STDLIB_H 1
#define HAVE_STRING_H 1
#define HAVE_MEMORY_H 1
#define HAVE_STRINGS_H 1
#define HAVE_INTTYPES_H 1
#define HAVE_STDINT_H 1
#define HAVE_UNISTD_H 1
#define HAVE_DLFCN_H 1
#define LT_OBJDIR ".libs/"
#define HAVE_LIBM 1
#define HAVE_LIBDL 1
#define STDC_HEADERS 1
#define TIME_WITH_SYS_TIME 1
#define HAVE_SYS_RESOURCE_H 1
#define HAVE_SYS_TIME_H 1
#define HAVE_UNISTD_H 1
#define HAVE_SYS_IOCTL_H 1
#define HAVE_SYS_STAT_H 1
#define HAVE_SYS_SOCKET_H 1
#define HAVE_SYS_TYPES_H 1
#define HAVE_STDDEF_H 1
#define HAVE_SETJMP_H 1
#define HAVE_FEATURES_H 1
#define HAVE_DIRENT_H 1
#define HAVE_STDINT_H 1
#define HAVE_SYS_TIMEB_H 1
#define HAVE_FSEEKO 1
#define HAVE_FTELLO 1
#define SIZEOF_CHAR 1
#define SIZEOF_SHORT 2
#define SIZEOF_INT 4
#define SIZEOF_UNSIGNED 4
#define SIZEOF_LONG 8
#define SIZEOF_LONG_LONG 8
#define SIZEOF___INT64 0
#define SIZEOF_FLOAT 4
#define SIZEOF_DOUBLE 8
#define SIZEOF_LONG_DOUBLE 16
#include <sys/types.h>
#include <stdint.h>
#define SIZEOF_INT8_T 1
#define SIZEOF_UINT8_T 1
#define SIZEOF_INT_LEAST8_T 1
#define SIZEOF_UINT_LEAST8_T 1
#define SIZEOF_INT_FAST8_T 1
#define SIZEOF_UINT_FAST8_T 1
#define SIZEOF_INT16_T 2
#define SIZEOF_UINT16_T 2
#define SIZEOF_INT_LEAST16_T 2
#define SIZEOF_UINT_LEAST16_T 2
#define SIZEOF_INT_FAST16_T 8
#define SIZEOF_UINT_FAST16_T 8
#define SIZEOF_INT32_T 4
#define SIZEOF_UINT32_T 4
#define SIZEOF_INT_LEAST32_T 4
#define SIZEOF_UINT_LEAST32_T 4
#define SIZEOF_INT_FAST32_T 8
#define SIZEOF_UINT_FAST32_T 8
#define SIZEOF_INT64_T 8
#define SIZEOF_UINT64_T 8
#define SIZEOF_INT_LEAST64_T 8
#define SIZEOF_UINT_LEAST64_T 8
#define SIZEOF_INT_FAST64_T 8
#define SIZEOF_UINT_FAST64_T 8
#define SIZEOF_SIZE_T 8
#define SIZEOF_SSIZE_T 8
#define SIZEOF_PTRDIFF_T 8
#include <sys/types.h> /*for off_t definition*/
#define SIZEOF_OFF_T 8
#define SIZEOF_OFF64_T 0
#define DEV_T_IS_SCALAR 1
#define HAVE_ZLIB_H 1
#define HAVE_LIBZ 1
#define HAVE_FILTER_DEFLATE 1
#define HAVE_SZLIB_H 1
#define HAVE_LIBSZ 1
#define HAVE_FILTER_SZIP 1
#define HAVE_TM_GMTOFF 1
#define HAVE_TIMEZONE 1
#define HAVE_STAT_ST_BLOCKS 1
#define HAVE_IOCTL 1
#define HAVE_TIOCGWINSZ 1
#define HAVE_TIOCGETD 1
#define HAVE_ALARM 1
#define HAVE_CLOCK_GETTIME 1
#define HAVE_DIFFTIME 1
#define HAVE_FORK 1
#define HAVE_FREXPF 1
#define HAVE_FREXPL 1
#define HAVE_GETHOSTNAME 1
#define HAVE_GETPWUID 1
#define HAVE_GETRUSAGE 1
#define HAVE_GETTIMEOFDAY 1
#define HAVE_LSTAT 1
#define HAVE_RAND_R 1
#define HAVE_RANDOM 1
#define HAVE_SIGNAL 1
#define HAVE_LONGJMP 1
#define HAVE_SETJMP 1
#define HAVE_SIGLONGJMP 1
#define HAVE_SIGPROCMASK 1
#define HAVE_SNPRINTF 1
#define HAVE_SRANDOM 1
#define HAVE_STRDUP 1
#define HAVE_SYMLINK 1
#define HAVE_SYSTEM 1
#define HAVE_TMPFILE 1
#define HAVE_ASPRINTF 1
#define HAVE_VASPRINTF 1
#define HAVE_VSNPRINTF 1
#define HAVE_WAITPID 1
#define HAVE_ATTRIBUTE 1
#define HAVE_C99_FUNC 1
#define HAVE_FUNCTION 1
#define HAVE_C99_DESIGNATED_INITIALIZER 1
#define PRINTF_LL_WIDTH "l"
#define SYSTEM_SCOPE_THREADS 1
#define CLEAR_MEMORY 1
configure: exit 1
