I tried the beta, and I got a similar error.
This is a controlled system, so I cannot upgrade gcc or the kernel. However, I tried to run on a SUSE 10 machine that looks like the following and got the same problem with both 2.5 and 2.6.
Linux duckster 2.6.16.60-0.21-smp #1 SMP Tue May 6 12:41:02 UTC 2008 x86_64 x86_64 x86_64 GNU/Linux
$ gcc -v
Using built-in specs.
Target: x86_64-suse-linux
Configured with: ../configure --enable-threads=posix --prefix=/usr --with-local-prefix=/usr/local --infodir=/usr/share/info --mandir=/usr/share/man --libdir=/usr/lib64 --libexecdir=/usr/lib64 --enable-languages=c,c++,objc,fortran,obj-c++,java,ada --enable-checking=release --with-gxx-include-dir=/usr/include/c++/4.1.2 --enable-ssp --disable-libssp --disable-libgcj --with-slibdir=/lib64 --with-system-zlib --enable-shared --enable-__cxa_atexit --enable-libstdcxx-allocator=new --program-suffix= --enable-version-specific-runtime-libs --without-system-libunwind --with-cpu=generic --host=x86_64-suse-linux
Thread model: posix
gcc version 4.1.2 20070115 (SUSE Linux)
Also, I did build HDFView from the source for 2.5 and got the same problem.
Since ld-linux.so.2 is the crashing library, I think it's crashing when trying to load the HDF5 library, but I couldn't figure out where. I tried putting prints above the various loadLibrary calls but nothing was showing up. Do you think I should try harder down that route?
David McCloskey
(412) 374-3789
···
_____________________________________________
From: hdf-forum-bounces@hdfgroup.org [mailto:hdf-forum-bounces@hdfgroup.org] On Behalf Of Peter Cao
Sent: Monday, December 07, 2009 4:36 PM
To: hdf-forum@hdfgroup.org
Subject: Re: [Hdf-forum] HDFView 2.5 Error
It may be a problem of the old linux kernel. HDFView was build on Linux
2.6.18 and
you are using 2.6.5. Or it may be a problem of gcc library. HDFView was
built with
gcc version 4.1.2.
Did you try 2.6 beta (ftp://ftp.hdfgroup.org/HDF5/hdf-java/v26b1/ )?
A couple of things you can try,
1) upgrade gcc (simplest solution, most likely it will solve the problem)
2) upgrade linux kernel or
3) build hdfview from the source
Thanks
--pc
McCloskey, David L. wrote:
I used the installer on linux to install HDFView 2.5. When I try to
run it, I get this error (JVM is crashing).
$ ./hdfview
#
# An unexpected error has been detected by Java Runtime Environment:
#
# SIGFPE (0x8) at pc=0x40008016, pid=26153, tid=1075682224
#
# Java VM: Java HotSpot(TM) Server VM (1.6.0-b105 mixed mode)
# Problematic frame:
# C [ld-linux.so.2+0x8016]
#
# An error report file with more information is saved as
hs_err_pid26153.log
#
# If you would like to submit a bug report, please visit:
# http://java.sun.com/webapps/bugreport/crash.jsp
#
Aborted
I've attached the file mentioned.
I've also tried this with the "with VM" version as well as downloading
hdf-java and compiling myself from scratch. And I always am getting a
SIGFPE in ld-linux on a call from System.loadLibrary.
Anyone have any ideas about this problem?
Some more info below:
$ uname -a
Linux circlew 2.6.5-7.244-bigsmp #1 SMP Mon Dec 12 18:32:25 UTC 2005
i686 i686 i386 GNU/Linux
$ /develop/unix/sccoe_tools/opt/java/jdk1.6.0_14-32/bin/java -version
java version "1.6.0_14"
Java(TM) SE Runtime Environment (build 1.6.0_14-b08)
Java HotSpot(TM) Server VM (build 14.0-b16, mixed mode)
(Tried with this and an older version mentioned in the hs err log.)
*David McCloskey*
Lead Programmer Analyst
Software Development
Core Engineering
Nuclear Fuel
Westinghouse Electric Company
Energy Center
4350 Northern Pike
Monroeville, PA, 15146, USA
Phone: +1 (412) 374-3789
Fax: +1 (412) 374-4500
Email: mcclosdl@westinghouse.com
Home Page: www.westinghousenuclear.com
------------------------------------------------------------------------
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Hdf-forum is for HDF software users discussion.
Hdf-forum@hdfgroup.org
http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
_______________________________________________
Hdf-forum is for HDF software users discussion.
Hdf-forum@hdfgroup.org
http://mail.hdfgroup.org/mailman/listinfo/hdf-forum_hdfgroup.org
