Dear HDF5 Community,
I was curious if anyone had any experience with building HDF5 v1.8 on a Cray XT system using the GNU compiler suite (v4.2.3). During the build the H5Tinit.c file is generated but contains many syntax errors (in particular uncompleted comments). This prevents the remainder of the build to complete successfully. I notice this also happens for the PGI compiler suite also. With PGI I managed to manually fix the comments and the compilation seems to move on successfully. Unfortunately, this doesn't seem to work for the GNU version as it complains further about the 'if' statements etc.
I have attached the raw output of H5Tinit.c (generated using a version of H5detect built with the GNU v4.2.3 compiler suite) which shows clearly the ill-formed code. I would be grateful if anyone could suggest a way to resolve this problem.
Regards,
Tim.
--
Timothy Stitt Ph.D
HPC Applications Analyst
Swiss National Supercomputing Centre (CSCS)
Galleria 2 - Via Cantonale
CH-6928 Manno, Switzerland
+41 (0) 91 610 8233
stitt@cscs.ch
/* Generated automatically by H5detect -- do not edit */
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* Copyright by The HDF Group. *
* Copyright by the Board of Trustees of the University of Illinois. *
* All rights reserved. *
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
* the files COPYING and Copyright.html. COPYING can be found at the root *
* of the source code distribution tree; Copyright.html can be found at the *
* root level of an installed copy of the electronic HDF5 document set and *
* is linked from the top-level documents page. It can also be found at *
* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
* access to either file, you may request a copy from help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
This machine-generated source code contains
information about the various integer and
floating point numeric formats found on this
architecture. The parameters below should be
checked carefully and errors reported to the
HDF5 maintainer.
Each of the numeric formats listed below are
printed from most significant bit to least
significant bit even though the actual bytes
might be stored in a different order in
memory. The integers above each binary byte
indicate the relative order of the bytes in
memory; little-endian machines have
decreasing numbers while big-endian machines
have increasing numbers.
The fields of the numbers are printed as
letters with `S' for the mantissa sign bit,
`M' for the mantissa magnitude, and `E' for
the exponent. The exponent has an associated
bias which can be subtracted to find the
true exponent. The radix point is assumed
to be before the first `M' bit. Any bit
of a floating-point value not falling into one
of these categories is printed as a question
mark. Bits of integer types are printed as
`I' for 2's complement and `U' for magnitude.
If the most significant bit of the normalized
mantissa (always a `1' except for `0.0') is
not stored then an `implicit=yes' appears
under the field description. In thie case,
the radix point is still assumed to be
before the first `M' but after the implicit
bit.
*
* Modifications:
*
* DO NOT MAKE MODIFICATIONS TO THIS FILE!
* It was generated by code in `H5detect.c'.
-------------------------------------------------------------------------
*/
#define H5T_PACKAGE /*suppress error about including H5Tpkg.h*/
#include "H5private.h"
#include "H5Iprivate.h"
#include "H5Eprivate.h"
#include "H5FLprivate.h"
#include "H5Tpkg.h"
herr_t
H5TN_init_interface(void)
{
H5T_t *dt = NULL;
herr_t ret_value = SUCCEED;
FUNC_ENTER_NOAPI(H5TN_init_interface, FAIL);
/*
IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
IIIIIIII IIIIIIII IIIIIIII IIIIIIII
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
UUUUUUUU UUUUUUUU UUUUUUUU UUUUUUUU
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
SEEEEEEE EMMMMMMM MMMMMMMM MMMMMMMM
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
SEEEEEEE EEEEMMMM MMMMMMMM MMMMMMMM
MMMMMMMM MMMMMMMM MMMMMMMM MMMMMMMM
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/*
??? ??? ??? ???
??? ??? SEEEEEEE EEEEEEEE
MMMMMMMM MMMMMMMM MMMMMMMM MMMMMMMM
* Alignment: none
*/
dt->shared->u.atomic.order = H5T_ORDER_LE;
/* Structure alignment for pointers, hvl_t, hobj_ref_t, hdset_reg_ref_t */
done:
if(ret_value<0) {
if(dt != NULL) {
if(dt->shared != NULL)
H5FL_FREE(H5T_shared_t, dt->shared);
H5FL_FREE(H5T_t, dt);
} /* end if */
}
FUNC_LEAVE_NOAPI(ret_value);
}
*
* Created: Jul 9, 2008
* @palu7 *
* Purpose: * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
* * 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_SCHAR_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_SCHAR_ALIGN_g = 1;
H5T_NATIVE_SCHAR_COMP_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UCHAR_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UCHAR_ALIGN_g = 1;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_SHORT_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_SHORT_ALIGN_g = 1;
H5T_NATIVE_SHORT_COMP_ALIGN_g = 2;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_USHORT_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_USHORT_ALIGN_g = 1;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_ALIGN_g = 1;
H5T_NATIVE_INT_COMP_ALIGN_g = 4;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_LONG_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_LONG_ALIGN_g = 1;
H5T_NATIVE_LONG_COMP_ALIGN_g = 8;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_ULONG_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_ULONG_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT8_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT8_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_LEAST8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_LEAST8_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_LEAST8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_LEAST8_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_FAST8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_FAST8_ALIGN_g = 1;
* 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 1;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 8;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_FAST8_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_FAST8_ALIGN_g = 1;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT16_ALIGN_g = 1;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT16_ALIGN_g = 1;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_LEAST16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_LEAST16_ALIGN_g = 1;
* 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 2;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 16;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_LEAST16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_LEAST16_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_FAST16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_FAST16_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_FAST16_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_FAST16_ALIGN_g = 1;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT32_ALIGN_g = 1;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT32_ALIGN_g = 1;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_LEAST32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_LEAST32_ALIGN_g = 1;
* 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_LEAST32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_LEAST32_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_FAST32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_FAST32_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_FAST32_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_FAST32_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_LEAST64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_LEAST64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_LEAST64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_LEAST64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_INT_FAST64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_INT_FAST64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_UINT_FAST64_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_UINT_FAST64_ALIGN_g = 1;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_2;
if ((H5T_NATIVE_LLONG_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_LLONG_ALIGN_g = 1;
H5T_NATIVE_LLONG_COMP_ALIGN_g = 8;
* 7 6 5 4
* * 3 2 1 0
* if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_INTEGER;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.i.sign = H5T_SGN_NONE;
if ((H5T_NATIVE_ULLONG_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_ULLONG_ALIGN_g = 1;
* 3 2 1 0
* * Implicit bit? yes
if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_FLOAT;
dt->shared->size = 4;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 32;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.f.sign = 31;
dt->shared->u.atomic.u.f.epos = 23;
dt->shared->u.atomic.u.f.esize = 8;
dt->shared->u.atomic.u.f.ebias = 0x0000007f;
dt->shared->u.atomic.u.f.mpos = 0;
dt->shared->u.atomic.u.f.msize = 23;
dt->shared->u.atomic.u.f.norm = H5T_NORM_IMPLIED;
dt->shared->u.atomic.u.f.pad = H5T_PAD_ZERO;
if ((H5T_NATIVE_FLOAT_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_FLOAT_ALIGN_g = 1;
H5T_NATIVE_FLOAT_COMP_ALIGN_g = 4;
* 7 6 5 4
* * 3 2 1 0
* * Implicit bit? yes
if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_FLOAT;
dt->shared->size = 8;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 64;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.f.sign = 63;
dt->shared->u.atomic.u.f.epos = 52;
dt->shared->u.atomic.u.f.esize = 11;
dt->shared->u.atomic.u.f.ebias = 0x000003ff;
dt->shared->u.atomic.u.f.mpos = 0;
dt->shared->u.atomic.u.f.msize = 52;
dt->shared->u.atomic.u.f.norm = H5T_NORM_IMPLIED;
dt->shared->u.atomic.u.f.pad = H5T_PAD_ZERO;
if ((H5T_NATIVE_DOUBLE_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_DOUBLE_ALIGN_g = 1;
H5T_NATIVE_DOUBLE_COMP_ALIGN_g = 8;
* 15 14 13 12
* * 11 10 9 8
* * 7 6 5 4
* * 3 2 1 0
* * Implicit bit? no
if(NULL == (dt = H5T_alloc()))
HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, FAIL,"memory allocation failed")
dt->shared->state = H5T_STATE_IMMUTABLE;
dt->shared->type = H5T_FLOAT;
dt->shared->size = 16;
dt->shared->u.atomic.offset = 0;
dt->shared->u.atomic.prec = 80;
dt->shared->u.atomic.lsb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.msb_pad = H5T_PAD_ZERO;
dt->shared->u.atomic.u.f.sign = 79;
dt->shared->u.atomic.u.f.epos = 64;
dt->shared->u.atomic.u.f.esize = 15;
dt->shared->u.atomic.u.f.ebias = 0x00003fff;
dt->shared->u.atomic.u.f.mpos = 0;
dt->shared->u.atomic.u.f.msize = 64;
dt->shared->u.atomic.u.f.norm = H5T_NORM_NONE;
dt->shared->u.atomic.u.f.pad = H5T_PAD_ZERO;
if ((H5T_NATIVE_LDOUBLE_g = H5I_register (H5I_DATATYPE, dt))<0)
HGOTO_ERROR (H5E_DATATYPE, H5E_CANTINIT, FAIL,"can't initialize type system (atom registration failure");
H5T_NATIVE_LDOUBLE_ALIGN_g = 1;
H5T_NATIVE_LDOUBLE_COMP_ALIGN_g = 16;
/* Set the native order for this machine */
H5T_native_order_g = H5T_ORDER_LE;
H5T_POINTER_COMP_ALIGN_g = 8;
H5T_HVL_COMP_ALIGN_g = 8;
H5T_HOBJREF_COMP_ALIGN_g = 8;
H5T_HDSETREGREF_COMP_ALIGN_g = 1;
----------------------------------------------------------------------
This mailing list is for HDF software users discussion.
To subscribe to this list, send a message to hdf-forum-subscribe@hdfgroup.org.
To unsubscribe, send a message to hdf-forum-unsubscribe@hdfgroup.org.
We currently don't have any funding to support the Cray XT, but one tactic that might get you good results would be to take a copy of H5Tinit.c from a machine that's as similar to the Cray XT as possible and then revise the output to tweak it for the Cray.