1.8.13 'make check' failures on OS X

Hi all,

After seeing the other messages here, I tried a basic

./configure
make check

on my OS X 10.8.5 machine with clang and everything passed until near the end, then I got this:

Testing h5dump --enable-error-stack -d integer -o out1.bin -b LE tbina PASSED
Testing h5dump --enable-error-stack -d /g2/dset2 -b -o tstr2bin2.txt t PASSED
Testing h5dump --enable-error-stack -d /g6/dset6 -b -o tstr2bin6.txt t PASSED
Testing h5dump --enable-error-stack -d integer -o out1.bin -b tbinary. PASSED
Running h5import out1.bin -c out3.h5import -o out1.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out1.h5 /integer /integer h5diff: <out1.h5>: unable to open file
*FAILED*
Running h5import out1.bin -c tbin1.ddl -o out1D.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out1D.h5 /integer /integer h5diff: <out1D.h5>: unable to open file
*FAILED*
Testing h5dump --enable-error-stack -b BE -d float -o out2.bin tbinary PASSED
Testing h5dump --enable-error-stack -d integer -o out3.bin -b NATIVE t PASSED
Running h5import out3.bin -c out3.h5import -o out3.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out3.h5 /integer /integer h5diff: <out3.h5>: unable to open file
*FAILED*
Running h5import out3.bin -c tbin3.ddl -o out3D.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out3D.h5 /integer /integer h5diff: <out3D.h5>: unable to open file
*FAILED*
Testing h5dump --enable-error-stack -d double -b FILE -o out4.bin tbin PASSED
Testing h5dump --enable-error-stack tdatareg.h5 PASSED
Testing h5dump --enable-error-stack -R tdatareg.h5 PASSED
Testing h5dump --enable-error-stack tattrreg.h5 PASSED
Testing h5dump --enable-error-stack -R tattrreg.h5 PASSED
Testing h5dump --enable-error-stack -d /Dataset1 -s 0 -R -y -o tbinreg PASSED
Testing h5dump --enable-error-stack --group=1 --sort_by=creation_order PASSED
Testing h5dump --enable-error-stack --group=1 --sort_by=creation_order PASSED
Testing h5dump --enable-error-stack -g 2 -q name -z ascending tordergr PASSED
Testing h5dump --enable-error-stack -g 2 -q name -z descending torderg PASSED
Testing h5dump --enable-error-stack -q creation_order tordergr.h5 PASSED
Testing h5dump --enable-error-stack -H --sort_by=name --sort_order=asc PASSED
Testing h5dump --enable-error-stack -H --sort_by=name --sort_order=des PASSED
Testing h5dump --enable-error-stack -H --sort_by=creation_order --sort PASSED
Testing h5dump --enable-error-stack -H --sort_by=creation_order --sort PASSED
Testing h5dump --enable-error-stack --sort_by=name --sort_order=ascend PASSED
Testing h5dump --enable-error-stack --sort_by=name --sort_order=descen PASSED
Testing h5dump --enable-error-stack -m %.7f tfpformat.h5 PASSED
Testing h5dump --enable-error-stack textlinksrc.h5 PASSED
Testing h5dump --enable-error-stack textlinkfar.h5 PASSED
Testing h5dump --enable-error-stack textlink.h5 PASSED
Testing h5dump --enable-error-stack filter_fail.h5 PASSED
Testing h5dump --enable-error-stack -y -o tall-6.txt -d /g1/g1.1/dset1 PASSED
h5dump tests failed with 8 errors.
       22.92 real 13.57 user 11.52 sys
make[5]: *** [testh5dump.sh.chkexe_] Error 1
make[4]: *** [build-check-s] Error 2
make[3]: *** [test] Error 2
make[2]: *** [check-am] Error 2
make[1]: *** [check-recursive] Error 1
make: *** [check-recursive] Error 1

Please use

./configure
make
make check

We are aware of the test/tools dependencies issues,

Elena

Next report please :slight_smile:

···

~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Elena Pourmal The HDF Group http://hdfgroup.org
1800 So. Oak St., Suite 203, Champaign IL 61820
217.531.6112
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

On May 15, 2014, at 5:28 PM, Sean McBride <sean@rogue-research.com> wrote:

Hi all,

After seeing the other messages here, I tried a basic

./configure
make check

on my OS X 10.8.5 machine with clang and everything passed until near the end, then I got this:

Testing h5dump --enable-error-stack -d integer -o out1.bin -b LE tbina PASSED
Testing h5dump --enable-error-stack -d /g2/dset2 -b -o tstr2bin2.txt t PASSED
Testing h5dump --enable-error-stack -d /g6/dset6 -b -o tstr2bin6.txt t PASSED
Testing h5dump --enable-error-stack -d integer -o out1.bin -b tbinary. PASSED
Running h5import out1.bin -c out3.h5import -o out1.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out1.h5 /integer /integer h5diff: <out1.h5>: unable to open file
*FAILED*
Running h5import out1.bin -c tbin1.ddl -o out1D.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out1D.h5 /integer /integer h5diff: <out1D.h5>: unable to open file
*FAILED*
Testing h5dump --enable-error-stack -b BE -d float -o out2.bin tbinary PASSED
Testing h5dump --enable-error-stack -d integer -o out3.bin -b NATIVE t PASSED
Running h5import out3.bin -c out3.h5import -o out3.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out3.h5 /integer /integer h5diff: <out3.h5>: unable to open file
*FAILED*
Running h5import out3.bin -c tbin3.ddl -o out3D.h5 testh5dump.sh: line 913: /Users/sean/RogueSVNWorkingCopy3/3rdParty/HDF5/trunk/starting_point/hdf5-1.8.13/tools/h5dump/../h5import/h5import: No such file or directory
*FAILED*
Running h5diff tbinary.h5 out3D.h5 /integer /integer h5diff: <out3D.h5>: unable to open file
*FAILED*
Testing h5dump --enable-error-stack -d double -b FILE -o out4.bin tbin PASSED
Testing h5dump --enable-error-stack tdatareg.h5 PASSED
Testing h5dump --enable-error-stack -R tdatareg.h5 PASSED
Testing h5dump --enable-error-stack tattrreg.h5 PASSED
Testing h5dump --enable-error-stack -R tattrreg.h5 PASSED
Testing h5dump --enable-error-stack -d /Dataset1 -s 0 -R -y -o tbinreg PASSED
Testing h5dump --enable-error-stack --group=1 --sort_by=creation_order PASSED
Testing h5dump --enable-error-stack --group=1 --sort_by=creation_order PASSED
Testing h5dump --enable-error-stack -g 2 -q name -z ascending tordergr PASSED
Testing h5dump --enable-error-stack -g 2 -q name -z descending torderg PASSED
Testing h5dump --enable-error-stack -q creation_order tordergr.h5 PASSED
Testing h5dump --enable-error-stack -H --sort_by=name --sort_order=asc PASSED
Testing h5dump --enable-error-stack -H --sort_by=name --sort_order=des PASSED
Testing h5dump --enable-error-stack -H --sort_by=creation_order --sort PASSED
Testing h5dump --enable-error-stack -H --sort_by=creation_order --sort PASSED
Testing h5dump --enable-error-stack --sort_by=name --sort_order=ascend PASSED
Testing h5dump --enable-error-stack --sort_by=name --sort_order=descen PASSED
Testing h5dump --enable-error-stack -m %.7f tfpformat.h5 PASSED
Testing h5dump --enable-error-stack textlinksrc.h5 PASSED
Testing h5dump --enable-error-stack textlinkfar.h5 PASSED
Testing h5dump --enable-error-stack textlink.h5 PASSED
Testing h5dump --enable-error-stack filter_fail.h5 PASSED
Testing h5dump --enable-error-stack -y -o tall-6.txt -d /g1/g1.1/dset1 PASSED
h5dump tests failed with 8 errors.
      22.92 real 13.57 user 11.52 sys
make[5]: *** [testh5dump.sh.chkexe_] Error 1
make[4]: *** [build-check-s] Error 2
make[3]: *** [test] Error 2
make[2]: *** [check-am] Error 2
make[1]: *** [check-recursive] Error 1
make: *** [check-recursive] Error 1

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Ah, all passes then!

Cheers,

···

On Thu, 15 May 2014 17:34:45 -0500, Elena Pourmal said:

Please use

./configure
make
make check

We are aware of the test/tools dependencies issues,

--
____________________________________________________________
Sean McBride, B. Eng sean@rogue-research.com
Rogue Research www.rogue-research.com
Mac Software Developer Montréal, Québec, Canada