SIGFPE in HDFView

Does the attached error log look familiar to anyone? I downloaded and ran hdfview_install_linux64.bin, which installed without complaint. But ./hdfview crashes with SIGFPE on initialisation. The error appears to be connected with the loading of a native library -- but i can't see which one. All the dynamic linraries seem to be coming from HFDView's own installed JRE, or to be standard system libraries -- i.e., there seems to be no interaction with the local java installation. I'm running on a 8-cpu X64 cluster node running Debian linux.

TIA for any advice (and apologies for the long post).

--TS

···

#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGFPE (0x8) at pc=0x00002aaaaaab2b83, pid=4295, tid=1076017504
#
# JRE version: 6.0_16-b01
# Java VM: Java HotSpot(TM) 64-Bit Server VM (14.2-b01 mixed mode linux-amd64 )
# Problematic frame:
# C [ld-linux-x86-64.so.2+0x7b83]
#
# If you would like to submit a bug report, please visit:
# http://java.sun.com/webapps/bugreport/crash.jsp
# The crash happened outside the Java Virtual Machine in native code.
# See problematic frame for where to report the bug.
#

--------------- T H R E A D ---------------

Current thread (0x0000000040111800): JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

siginfo:si_signo=SIGFPE: si_errno=0, si_code=1 (FPE_INTDIV), si_addr=0x00002aaaaaab2b83

Registers:
RAX=0x000000000acaff29, RBX=0x0000000000000000, RCX=0x0000000000000000, RDX=0x0000000000000000
RSP=0x0000000040227110, RBP=0x0000000040227300, RSI=0x000000000acaff29, RDI=0x00002aaaf6660029
R8 =0x00002aaaf55232e0, R9 =0x0000000000000000, R10=0x0000000000000000, R11=0x0000000000000001
R12=0x00000000402272c0, R13=0x00002aaaf5523030, R14=0x0000000000000000, R15=0x00002aaaf6655b70
RIP=0x00002aaaaaab2b83, EFL=0x0000000000010246, CSGSFS=0x0000000000000033, ERR=0x0000000000000000
  TRAPNO=0x0000000000000000

Top of Stack: (sp=0x0000000040227110)
0x0000000040227110: 0000000000000000 0000000000000000
0x0000000040227120: 00000000402272c0 00002aaaf665a8b0
0x0000000040227130: 000000000acaff29 00002aaaf6660029
0x0000000040227140: 0000000000000000 0000000000000004
0x0000000040227150: 00002aaaf665e498 00002aaaf6664a58
0x0000000040227160: 00000000aaef9001 0000000000000000
0x0000000040227170: 00002aaaab11cad0 00002aaaf5523558
0x0000000040227180: 0000000000000002 00002aaaaaef4388
0x0000000040227190: 0000000040227120 00002aaaf5523380
0x00000000402271a0: 0000000040227300 00000000402272c0
0x00000000402271b0: 000000000acaff29 0000000000000000
0x00000000402271c0: 00002aaaf6660029 00002aaaaaab2f9a
0x00000000402271d0: 0000000000000000 0000000000000001
0x00000000402271e0: 0000000000000000 00002aaa00000000
0x00000000402271f0: 0000000000000004 00000000402273f0
0x0000000040227200: 00002aaaab11cc50 0000000000000000
0x0000000040227210: 0000000400000001 00000000aabc23c8
0x0000000040227220: 0000000000000000 00002aaaf5523378
0x0000000040227230: 00000000402273b8 00002aaaf5523030
0x0000000040227240: 0000000000000000 00002aaaf5522fe0
0x0000000040227250: 0000000040227210 00000000402274c0
0x0000000040227260: 00002aaaf6664a17 00002aaaaaab55c4
0x0000000040227270: 0000000000000001 000000004010ac50
0x0000000040227280: 0000000040227240 00000000402274c0
0x0000000040227290: 00002aaaf6664a0d 00002aaaaaab55c4
0x00000000402272a0: 8009c03400000001 00002aaaf5523030
0x00000000402272b0: 0000000040227270 063144024404a000
0x00000000402272c0: 0000000000000000 0000000000000000
0x00000000402272d0: 2062128234004120 00002aaaf5523030
0x00000000402272e0: 00002aaaf6653000 0000000000000006
0x00000000402272f0: 00002aaaf5523030 00002aaaf6668178
0x0000000040227300: 00000000402273f0 00002aaaaaab4669

Instructions: (pc=0x00002aaaaaab2b83)
0x00002aaaaaab2b73: 8b 85 20 03 00 00 48 89 44 24 48 48 8b 44 24 20
0x00002aaaaaab2b83: 48 f7 f3 49 8b 85 e0 02 00 00 44 8b 24 90 45 85

Stack: [0x000000004012b000,0x000000004022c000], sp=0x0000000040227110, free space=1008k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
C [ld-linux-x86-64.so.2+0x7b83]
C [ld-linux-x86-64.so.2+0x9669]
C [libc.so.6+0xfc623]
C [ld-linux-x86-64.so.2+0xb7d1]
C [libdl.so.2+0x1115]

Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
j java.lang.ClassLoader$NativeLibrary.load(Ljava/lang/String;)V+0
j java.lang.ClassLoader.loadLibrary0(Ljava/lang/Class;Ljava/io/File;)Z+300
j java.lang.ClassLoader.loadLibrary(Ljava/lang/Class;Ljava/lang/String;Z)V+127
j java.lang.Runtime.load0(Ljava/lang/Class;Ljava/lang/String;)V+57
j java.lang.System.load(Ljava/lang/String;)V+7
j ncsa.hdf.hdflib.HDFLibrary.loadH4Lib()V+56
j ncsa.hdf.hdflib.HDFLibrary.<clinit>()V+4
v ~StubRoutines::call_stub
j ncsa.hdf.object.h4.H4File.<clinit>()V+0
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0
j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.object.FileFormat.<clinit>()V+27
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0
j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.view.ViewProperties.loadExtClass()Ljava/lang/ClassLoader;+424
j ncsa.hdf.view.HDFView.<init>(Ljava/lang/String;Ljava/util/List;IIII)V+60
j ncsa.hdf.view.HDFView.main([Ljava/lang/String;)V+490
v ~StubRoutines::call_stub
j sun.reflect.NativeMethodAccessorImpl.invoke0(Ljava/lang/reflect/Method;Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+0
j sun.reflect.NativeMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+87
j sun.reflect.DelegatingMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+6
j java.lang.reflect.Method.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+161
j com.zerog.lax.LAX.launch()V+227
j com.zerog.lax.LAX.main([Ljava/lang/String;)V+94
v ~StubRoutines::call_stub

--------------- P R O C E S S ---------------

Java Threads: ( => current thread )
  0x00002aaaf5521800 JavaThread "Image Fetcher 1" daemon [_thread_blocked, id=4384, stack(0x000000004153f000,0x0000000041640000)]
  0x00002aaaf551b800 JavaThread "Image Fetcher 0" daemon [_thread_blocked, id=4383, stack(0x000000004143e000,0x000000004153f000)]
  0x00002aaaf54ed000 JavaThread "AWT-XAWT" daemon [_thread_in_native, id=4382, stack(0x000000004133d000,0x000000004143e000)]
  0x00002aaaf5014800 JavaThread "Java2D Disposer" daemon [_thread_blocked, id=4381, stack(0x000000004123c000,0x000000004133d000)]
  0x00002aaaf4f77800 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=4379, stack(0x000000004103a000,0x000000004113b000)]
  0x00002aaaf4f72800 JavaThread "CompilerThread1" daemon [_thread_blocked, id=4378, stack(0x0000000040f39000,0x000000004103a000)]
  0x00002aaaf4f70800 JavaThread "CompilerThread0" daemon [_thread_blocked, id=4377, stack(0x0000000040e38000,0x0000000040f39000)]
  0x00002aaaf4f6e800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=4376, stack(0x0000000040d37000,0x0000000040e38000)]
  0x00002aaaf4f4b800 JavaThread "Finalizer" daemon [_thread_blocked, id=4375, stack(0x0000000040c36000,0x0000000040d37000)]
  0x00002aaaf4f4a800 JavaThread "Reference Handler" daemon [_thread_blocked, id=4374, stack(0x0000000040b35000,0x0000000040c36000)]
=>0x0000000040111800 JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

Other Threads:
  0x00002aaaf4d08000 VMThread [stack: 0x0000000040a34000,0x0000000040b35000] [id=4373]
  0x00002aaaf4f7a000 WatcherThread [stack: 0x000000004113b000,0x000000004123c000] [id=4380]

VM state:not at safepoint (normal execution)

VM Mutex/Monitor currently owned by a thread: None

Heap
PSYoungGen total 19136K, used 5628K [0x00002aaadf310000, 0x00002aaae0860000, 0x00002aaaf4860000)
  eden space 16448K, 34% used [0x00002aaadf310000,0x00002aaadf88f108,0x00002aaae0320000)
  from space 2688K, 0% used [0x00002aaae05c0000,0x00002aaae05c0000,0x00002aaae0860000)
  to space 2688K, 0% used [0x00002aaae0320000,0x00002aaae0320000,0x00002aaae05c0000)
PSOldGen total 43712K, used 0K [0x00002aaab4860000, 0x00002aaab7310000, 0x00002aaadf310000)
  object space 43712K, 0% used [0x00002aaab4860000,0x00002aaab4860000,0x00002aaab7310000)
PSPermGen total 21248K, used 9052K [0x00002aaaaf460000, 0x00002aaab0920000, 0x00002aaab4860000)
  object space 21248K, 42% used [0x00002aaaaf460000,0x00002aaaafd37310,0x00002aaab0920000)

Dynamic libraries:
40000000-40009000 r-xp 00000000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
40108000-4010a000 rwxp 00008000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
4010a000-4012b000 rwxp 4010a000 00:00 0 [heap]
4012b000-4012e000 ---p 4012b000 00:00 0
4012e000-4022c000 rwxp 4012e000 00:00 0
4022c000-4022d000 ---p 4022c000 00:00 0
4022d000-4032d000 rwxp 4022d000 00:00 0
4032d000-4032e000 ---p 4032d000 00:00 0
4032e000-4042e000 rwxp 4032e000 00:00 0
4042e000-4042f000 ---p 4042e000 00:00 0
4042f000-4052f000 rwxp 4042f000 00:00 0
4052f000-40530000 ---p 4052f000 00:00 0
40530000-40630000 rwxp 40530000 00:00 0
40630000-40631000 ---p 40630000 00:00 0
40631000-40731000 rwxp 40631000 00:00 0
40731000-40732000 ---p 40731000 00:00 0
40732000-40832000 rwxp 40732000 00:00 0
40832000-40833000 ---p 40832000 00:00 0
40833000-40933000 rwxp 40833000 00:00 0
40933000-40934000 ---p 40933000 00:00 0
40934000-40a34000 rwxp 40934000 00:00 0
40a34000-40a35000 ---p 40a34000 00:00 0
40a35000-40b35000 rwxp 40a35000 00:00 0
40b35000-40b38000 ---p 40b35000 00:00 0
40b38000-40c36000 rwxp 40b38000 00:00 0
40c36000-40c39000 ---p 40c36000 00:00 0
40c39000-40d37000 rwxp 40c39000 00:00 0
40d37000-40d3a000 ---p 40d37000 00:00 0
40d3a000-40e38000 rwxp 40d3a000 00:00 0
40e38000-40e3b000 ---p 40e38000 00:00 0
40e3b000-40f39000 rwxp 40e3b000 00:00 0
40f39000-40f3c000 ---p 40f39000 00:00 0
40f3c000-4103a000 rwxp 40f3c000 00:00 0
4103a000-4103d000 ---p 4103a000 00:00 0
4103d000-4113b000 rwxp 4103d000 00:00 0
4113b000-4113c000 ---p 4113b000 00:00 0
4113c000-4123c000 rwxp 4113c000 00:00 0
4123c000-4123f000 ---p 4123c000 00:00 0
4123f000-4133d000 rwxp 4123f000 00:00 0
4133d000-41340000 ---p 4133d000 00:00 0
41340000-4143e000 rwxp 41340000 00:00 0
4143e000-41441000 ---p 4143e000 00:00 0
41441000-4153f000 rwxp 41441000 00:00 0
4153f000-41542000 ---p 4153f000 00:00 0
41542000-41640000 rwxp 41542000 00:00 0
2aaaaaaab000-2aaaaaac2000 r-xp 00000000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaaac2000-2aaaaaaec000 rwxp 2aaaaaac2000 00:00 0
2aaaaaaec000-2aaaaaaf0000 r-xs 0004d000 00:1f 7336173 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfview.jar
2aaaaaaf0000-2aaaaaaf3000 r-xs 0001b000 00:1f 7336174 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/junit.jar
2aaaaaaf3000-2aaaaaaf4000 r-xs 00008000 00:1f 7336169 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf4obj.jar
2aaaaaaf4000-2aaaaaaf6000 r-xs 00018000 00:1f 7336167 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/fits.jar
2aaaaaaf6000-2aaaaaaf8000 r-xs 00008000 00:1f 7336168 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf.jar
2aaaaaaf8000-2aaaaaaf9000 r-xs 00004000 00:1f 7336172 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfobj.jar
2aaaaaaf9000-2aaaaaafa000 r-xs 00002000 00:1f 7336166 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar
2aaaaaafa000-2aaaaaafb000 r-xs 0000b000 00:1f 7336170 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5.jar
2aaaaaafb000-2aaaaaafc000 r-xs 00002000 00:1f 7336165 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar
2aaaaaafc000-2aaaaab03000 r-xs 00080000 00:1f 7336178 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/netcdf.jar
2aaaaab03000-2aaaaab04000 r-xs 0000c000 00:1f 7336171 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5obj.jar
2aaaaab04000-2aaaaab06000 r-xs 0000c000 00:1f 29282193 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lax.jar
2aaaaabc1000-2aaaaabc3000 rwxp 00016000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaabc3000-2aaaaabd3000 r-xp 00000000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaabd3000-2aaaaacd2000 ---p 00010000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd2000-2aaaaacd4000 rwxp 0000f000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd4000-2aaaaacd9000 rwxp 2aaaaacd4000 00:00 0
2aaaaacd9000-2aaaaace0000 r-xp 00000000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaace0000-2aaaaade1000 ---p 00007000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaade1000-2aaaaade3000 rwxp 00008000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaade3000-2aaaaade5000 r-xp 00000000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaade5000-2aaaaaee4000 ---p 00002000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee4000-2aaaaaee6000 rwxp 00001000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee6000-2aaaab007000 r-xp 00000000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab007000-2aaaab107000 ---p 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab107000-2aaaab11c000 r-xp 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11c000-2aaaab11f000 rwxp 00136000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11f000-2aaaab125000 rwxp 2aaaab11f000 00:00 0
2aaaab125000-2aaaab883000 r-xp 00000000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so
2aaaab883000-2aaaab982000 ---p 0075e000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so
2aaaab982000-2aaaabafa000 rwxp 0075d000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so
2aaaabafa000-2aaaabb38000 rwxp 2aaaabafa000 00:00 0
2aaaabb4e000-2aaaabbcf000 r-xp 00000000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabbcf000-2aaaabcce000 ---p 00081000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcce000-2aaaabcd0000 rwxp 00080000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcd0000-2aaaabcd7000 r-xp 00000000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabcd7000-2aaaabdd7000 ---p 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd7000-2aaaabdd9000 rwxp 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd9000-2aaaabde6000 r-xp 00000000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabde6000-2aaaabee5000 ---p 0000d000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee5000-2aaaabee8000 rwxp 0000c000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee8000-2aaaabf11000 r-xp 00000000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaabf11000-2aaaac010000 ---p 00029000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac010000-2aaaac017000 rwxp 00028000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac017000-2aaaac018000 r-xp 2aaaac017000 00:00 0
2aaaac018000-2aaaac019000 rwxp 2aaaac018000 00:00 0
2aaaac02d000-2aaaac041000 r-xp 00000000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac041000-2aaaac140000 ---p 00014000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac140000-2aaaac142000 rwxp 00013000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac142000-2aaaac144000 rwxp 2aaaac142000 00:00 0
2aaaac144000-2aaaac14b000 r-xp 00000000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so
2aaaac14b000-2aaaac24c000 ---p 00007000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so
2aaaac24c000-2aaaac24e000 rwxp 00008000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so
2aaaac24e000-2aaaac24f000 rwxp 2aaaac24e000 00:00 0
2aaaac24f000-2aaaac284000 r-xs 00000000 68:08 63071103 /var/db/nscd/passwd
2aaaac284000-2aaaac28c000 rwxs 00000000 68:06 75500767 /tmp/hsperfdata_ts6/4295
2aaaac28c000-2aaaac29a000 r-xp 00000000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac29a000-2aaaac39c000 ---p 0000e000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39c000-2aaaac39f000 rwxp 00010000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39f000-2aaaf4d0b000 rwxp 2aaaac39f000 00:00 0
2aaaf4d0b000-2aaaf4ea1000 r-xs 02fb3000 00:1f 9399626 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/rt.jar
2aaaf4ea1000-2aaaf5046000 rwxp 2aaaf4ea1000 00:00 0
2aaaf5046000-2aaaf51e5000 r-xp 00000000 68:08 54640618 /usr/lib/locale/locale-archive
2aaaf5200000-2aaaf52be000 rwxp 2aaaf5200000 00:00 0
2aaaf52be000-2aaaf5300000 ---p 2aaaf52be000 00:00 0
2aaaf5300000-2aaaf5535000 rwxp 2aaaf5300000 00:00 0
2aaaf5535000-2aaaf5600000 ---p 2aaaf5535000 00:00 0
2aaaf5600000-2aaaf5700000 rwxp 2aaaf5600000 00:00 0
2aaaf5700000-2aaaf5792000 r-xp 00000000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5792000-2aaaf5891000 ---p 00092000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5891000-2aaaf58aa000 rwxp 00091000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf58aa000-2aaaf58cf000 rwxp 2aaaf58aa000 00:00 0
2aaaf58cf000-2aaaf5911000 r-xp 00000000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so
2aaaf5911000-2aaaf5a10000 ---p 00042000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so
2aaaf5a10000-2aaaf5a1b000 rwxp 00041000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so
2aaaf5a1b000-2aaaf5a1d000 rwxp 2aaaf5a1b000 00:00 0
2aaaf5a33000-2aaaf5a43000 r-xp 00000000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5a43000-2aaaf5b43000 ---p 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b43000-2aaaf5b44000 rwxp 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b44000-2aaaf5c46000 r-xp 00000000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5c46000-2aaaf5d46000 ---p 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d46000-2aaaf5d4d000 rwxp 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d4d000-2aaaf5d52000 r-xp 00000000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5d52000-2aaaf5e52000 ---p 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e52000-2aaaf5e53000 rwxp 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e53000-2aaaf5e5b000 r-xp 00000000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5e5b000-2aaaf5f5a000 ---p 00008000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5a000-2aaaf5f5b000 rwxp 00007000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5b000-2aaaf5f5d000 r-xp 00000000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf5f5d000-2aaaf605c000 ---p 00002000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605c000-2aaaf605d000 rwxp 00001000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605d000-2aaaf6062000 r-xp 00000000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6062000-2aaaf6161000 ---p 00005000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6161000-2aaaf6162000 rwxp 00004000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6162000-2aaaf6197000 r-xs 00000000 68:08 63071105 /var/db/nscd/hosts
2aaaf6197000-2aaaf6215000 r-xp 00000000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so
2aaaf6215000-2aaaf6314000 ---p 0007e000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so
2aaaf6314000-2aaaf632a000 rwxp 0007d000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so
2aaaf632a000-2aaaf633b000 rwxp 2aaaf632a000 00:00 0
2aaaf633b000-2aaaf6345000 r-xp 00000000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6345000-2aaaf6444000 ---p 0000a000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6444000-2aaaf6445000 rwxp 00009000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6445000-2aaaf644e000 r-xp 00000000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf644e000-2aaaf654d000 ---p 00009000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654d000-2aaaf654e000 rwxp 00008000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654e000-2aaaf6553000 r-xp 00000000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6553000-2aaaf6652000 ---p 00005000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6652000-2aaaf6653000 rwxp 00004000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6653000-2aaaf6738000 r-xp 00000000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6738000-2aaaf6937000 ---p 000e5000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6937000-2aaaf693b000 rwxp 000e4000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf693b000-2aaaf696e000 rwxp 2aaaf693b000 00:00 0
7ffffffe9000-7ffffffff000 rwxp 7ffffffe9000 00:00 0 [stack]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vdso]

VM Arguments:
jvm_args: -Xmx1024m -Xms64m
java_command: com.zerog.lax.LAX /nfs/users/nfs_t/ts6/download/HDFView/hdfview/./hdfview.lax /tmp/env.properties.4295
Launcher Type: SUN_STANDARD

Environment Variables:
JAVA_HOME=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre
CLASSPATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfview.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/junit.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf4obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/fits.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/netcdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lax.jar:
PATH=/nfs/users/nfs_t/ts6/tools:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/software/bin:/software/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/solexa/bin:/software/solexa/bin:/software/bin:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/nvidia-cuda/cuda/bin
LD_LIBRARY_PATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/../lib/amd64:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/software/badger/lib:/software/oracle_client-10.2.0/lib:/software/solexa/lib
SHELL=/bin/bash
DISPLAY=sf-2-1-03:16.0

Signal Handlers:
SIGSEGV: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGBUS: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGFPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGPIPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGXFSZ: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGILL: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, sa_flags=0x00000000
SIGUSR2: [libjvm.so+0x597750], sa_mask[0]=0x00000000, sa_flags=0x10000004
SIGHUP: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGINT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGTERM: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGQUIT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004

--------------- S Y S T E M ---------------

OS:4.0

uname:Linux 2.6.22.19-lustre-1.6.7.2 #2 SMP Tue Sep 1 09:35:59 BST 2009 x86_64
libc:glibc 2.3.6 NPTL 2.3.6
rlimit: STACK 8515k, CORE infinity, NPROC 137215, NOFILE 1024, AS infinity
load average:0.00 0.00 0.00

CPU:total 8 (4 cores per cpu, 1 threads per core) family 6 model 15 stepping 7, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3

Memory: 4k page, physical 16463988k(10735008k free), swap 8192616k(8192556k free)

vm_info: Java HotSpot(TM) 64-Bit Server VM (14.2-b01) for linux-amd64 JRE (1.6.0_16-b01), built on Jul 31 2009 05:52:33 by "java_re" with gcc 3.2.2 (SuSE Linux)

time: Mon Jul 26 17:49:12 2010
elapsed time: 0 seconds

--
The Wellcome Trust Sanger Institute is operated by Genome Research Limited, a charity registered in England with number 1021457 and a company registered in England with number 2742969, whose registered office is 215 Euston Road, London, NW1 2BE.

The error indicates that the DHFView you are using is not compatible to your system.

Our linux64 distribution was built on CentOS (Linux xxxxxx 2.6.18-194.3.1.el5 #1 SMP Thu May 13 13:08:30 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux). At this point, I don't know if the problem is at the packed JRE or the Java HDF library.

Change JAVAPATH to the one used in your system at bin/hdfview.sh and run "hdfview.sh". If it does not work, most likely the
Java HDF library does not work on your system.

Thanks
--pc

Tom Skelly wrote:

···

Does the attached error log look familiar to anyone? I downloaded and ran hdfview_install_linux64.bin, which installed without complaint. But ./hdfview crashes with SIGFPE on initialisation. The error appears to be connected with the loading of a native library -- but i can't see which one. All the dynamic linraries seem to be coming from HFDView's own installed JRE, or to be standard system libraries -- i.e., there seems to be no interaction with the local java installation. I'm running on a 8-cpu X64 cluster node running Debian linux.

TIA for any advice (and apologies for the long post).

--TS

#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGFPE (0x8) at pc=0x00002aaaaaab2b83, pid=4295, tid=1076017504
#
# JRE version: 6.0_16-b01
# Java VM: Java HotSpot(TM) 64-Bit Server VM (14.2-b01 mixed mode linux-amd64 )
# Problematic frame:
# C [ld-linux-x86-64.so.2+0x7b83]
#
# If you would like to submit a bug report, please visit:
# http://java.sun.com/webapps/bugreport/crash.jsp
# The crash happened outside the Java Virtual Machine in native code.
# See problematic frame for where to report the bug.
#

--------------- T H R E A D ---------------

Current thread (0x0000000040111800): JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

siginfo:si_signo=SIGFPE: si_errno=0, si_code=1 (FPE_INTDIV), si_addr=0x00002aaaaaab2b83

Registers:
RAX=0x000000000acaff29, RBX=0x0000000000000000, RCX=0x0000000000000000, RDX=0x0000000000000000
RSP=0x0000000040227110, RBP=0x0000000040227300, RSI=0x000000000acaff29, RDI=0x00002aaaf6660029
R8 =0x00002aaaf55232e0, R9 =0x0000000000000000, R10=0x0000000000000000, R11=0x0000000000000001
R12=0x00000000402272c0, R13=0x00002aaaf5523030, R14=0x0000000000000000, R15=0x00002aaaf6655b70
RIP=0x00002aaaaaab2b83, EFL=0x0000000000010246, CSGSFS=0x0000000000000033, ERR=0x0000000000000000
TRAPNO=0x0000000000000000

Top of Stack: (sp=0x0000000040227110)
0x0000000040227110: 0000000000000000 0000000000000000
0x0000000040227120: 00000000402272c0 00002aaaf665a8b0
0x0000000040227130: 000000000acaff29 00002aaaf6660029
0x0000000040227140: 0000000000000000 0000000000000004
0x0000000040227150: 00002aaaf665e498 00002aaaf6664a58
0x0000000040227160: 00000000aaef9001 0000000000000000
0x0000000040227170: 00002aaaab11cad0 00002aaaf5523558
0x0000000040227180: 0000000000000002 00002aaaaaef4388
0x0000000040227190: 0000000040227120 00002aaaf5523380
0x00000000402271a0: 0000000040227300 00000000402272c0
0x00000000402271b0: 000000000acaff29 0000000000000000
0x00000000402271c0: 00002aaaf6660029 00002aaaaaab2f9a
0x00000000402271d0: 0000000000000000 0000000000000001
0x00000000402271e0: 0000000000000000 00002aaa00000000
0x00000000402271f0: 0000000000000004 00000000402273f0
0x0000000040227200: 00002aaaab11cc50 0000000000000000
0x0000000040227210: 0000000400000001 00000000aabc23c8
0x0000000040227220: 0000000000000000 00002aaaf5523378
0x0000000040227230: 00000000402273b8 00002aaaf5523030
0x0000000040227240: 0000000000000000 00002aaaf5522fe0
0x0000000040227250: 0000000040227210 00000000402274c0
0x0000000040227260: 00002aaaf6664a17 00002aaaaaab55c4
0x0000000040227270: 0000000000000001 000000004010ac50
0x0000000040227280: 0000000040227240 00000000402274c0
0x0000000040227290: 00002aaaf6664a0d 00002aaaaaab55c4
0x00000000402272a0: 8009c03400000001 00002aaaf5523030
0x00000000402272b0: 0000000040227270 063144024404a000
0x00000000402272c0: 0000000000000000 0000000000000000
0x00000000402272d0: 2062128234004120 00002aaaf5523030
0x00000000402272e0: 00002aaaf6653000 0000000000000006
0x00000000402272f0: 00002aaaf5523030 00002aaaf6668178
0x0000000040227300: 00000000402273f0 00002aaaaaab4669

Instructions: (pc=0x00002aaaaaab2b83)
0x00002aaaaaab2b73: 8b 85 20 03 00 00 48 89 44 24 48 48 8b 44 24 20
0x00002aaaaaab2b83: 48 f7 f3 49 8b 85 e0 02 00 00 44 8b 24 90 45 85

Stack: [0x000000004012b000,0x000000004022c000], sp=0x0000000040227110, free space=1008k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
C [ld-linux-x86-64.so.2+0x7b83]
C [ld-linux-x86-64.so.2+0x9669]
C [libc.so.6+0xfc623]
C [ld-linux-x86-64.so.2+0xb7d1]
C [libdl.so.2+0x1115]

Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
j java.lang.ClassLoader$NativeLibrary.load(Ljava/lang/String;)V+0
j java.lang.ClassLoader.loadLibrary0(Ljava/lang/Class;Ljava/io/File;)Z+300
j java.lang.ClassLoader.loadLibrary(Ljava/lang/Class;Ljava/lang/String;Z)V+127

j java.lang.Runtime.load0(Ljava/lang/Class;Ljava/lang/String;)V+57
j java.lang.System.load(Ljava/lang/String;)V+7
j ncsa.hdf.hdflib.HDFLibrary.loadH4Lib()V+56
j ncsa.hdf.hdflib.HDFLibrary.<clinit>()V+4
v ~StubRoutines::call_stub
j ncsa.hdf.object.h4.H4File.<clinit>()V+0
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0

j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.object.FileFormat.<clinit>()V+27
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0

j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.view.ViewProperties.loadExtClass()Ljava/lang/ClassLoader;+424
j ncsa.hdf.view.HDFView.<init>(Ljava/lang/String;Ljava/util/List;IIII)V+60
j ncsa.hdf.view.HDFView.main([Ljava/lang/String;)V+490
v ~StubRoutines::call_stub
j sun.reflect.NativeMethodAccessorImpl.invoke0(Ljava/lang/reflect/Method;Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+0

j sun.reflect.NativeMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+87

j sun.reflect.DelegatingMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+6

j java.lang.reflect.Method.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+161

j com.zerog.lax.LAX.launch()V+227
j com.zerog.lax.LAX.main([Ljava/lang/String;)V+94
v ~StubRoutines::call_stub

--------------- P R O C E S S ---------------

Java Threads: ( => current thread )
0x00002aaaf5521800 JavaThread "Image Fetcher 1" daemon [_thread_blocked, id=4384, stack(0x000000004153f000,0x0000000041640000)]
0x00002aaaf551b800 JavaThread "Image Fetcher 0" daemon [_thread_blocked, id=4383, stack(0x000000004143e000,0x000000004153f000)]
0x00002aaaf54ed000 JavaThread "AWT-XAWT" daemon [_thread_in_native, id=4382, stack(0x000000004133d000,0x000000004143e000)]
0x00002aaaf5014800 JavaThread "Java2D Disposer" daemon [_thread_blocked, id=4381, stack(0x000000004123c000,0x000000004133d000)]
0x00002aaaf4f77800 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=4379, stack(0x000000004103a000,0x000000004113b000)]
0x00002aaaf4f72800 JavaThread "CompilerThread1" daemon [_thread_blocked, id=4378, stack(0x0000000040f39000,0x000000004103a000)]
0x00002aaaf4f70800 JavaThread "CompilerThread0" daemon [_thread_blocked, id=4377, stack(0x0000000040e38000,0x0000000040f39000)]
0x00002aaaf4f6e800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=4376, stack(0x0000000040d37000,0x0000000040e38000)]
0x00002aaaf4f4b800 JavaThread "Finalizer" daemon [_thread_blocked, id=4375, stack(0x0000000040c36000,0x0000000040d37000)]
0x00002aaaf4f4a800 JavaThread "Reference Handler" daemon [_thread_blocked, id=4374, stack(0x0000000040b35000,0x0000000040c36000)]
=>0x0000000040111800 JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

Other Threads:
0x00002aaaf4d08000 VMThread [stack: 0x0000000040a34000,0x0000000040b35000] [id=4373]
0x00002aaaf4f7a000 WatcherThread [stack: 0x000000004113b000,0x000000004123c000] [id=4380]

VM state:not at safepoint (normal execution)

VM Mutex/Monitor currently owned by a thread: None

Heap
PSYoungGen total 19136K, used 5628K [0x00002aaadf310000, 0x00002aaae0860000, 0x00002aaaf4860000)
eden space 16448K, 34% used [0x00002aaadf310000,0x00002aaadf88f108,0x00002aaae0320000)
from space 2688K, 0% used [0x00002aaae05c0000,0x00002aaae05c0000,0x00002aaae0860000)
to space 2688K, 0% used [0x00002aaae0320000,0x00002aaae0320000,0x00002aaae05c0000)
PSOldGen total 43712K, used 0K [0x00002aaab4860000, 0x00002aaab7310000, 0x00002aaadf310000)
object space 43712K, 0% used [0x00002aaab4860000,0x00002aaab4860000,0x00002aaab7310000)
PSPermGen total 21248K, used 9052K [0x00002aaaaf460000, 0x00002aaab0920000, 0x00002aaab4860000)
object space 21248K, 42% used [0x00002aaaaf460000,0x00002aaaafd37310,0x00002aaab0920000)

Dynamic libraries:
40000000-40009000 r-xp 00000000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
40108000-4010a000 rwxp 00008000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
4010a000-4012b000 rwxp 4010a000 00:00 0 [heap]
4012b000-4012e000 ---p 4012b000 00:00 0
4012e000-4022c000 rwxp 4012e000 00:00 0
4022c000-4022d000 ---p 4022c000 00:00 0
4022d000-4032d000 rwxp 4022d000 00:00 0
4032d000-4032e000 ---p 4032d000 00:00 0
4032e000-4042e000 rwxp 4032e000 00:00 0
4042e000-4042f000 ---p 4042e000 00:00 0
4042f000-4052f000 rwxp 4042f000 00:00 0
4052f000-40530000 ---p 4052f000 00:00 0
40530000-40630000 rwxp 40530000 00:00 0
40630000-40631000 ---p 40630000 00:00 0
40631000-40731000 rwxp 40631000 00:00 0
40731000-40732000 ---p 40731000 00:00 0
40732000-40832000 rwxp 40732000 00:00 0
40832000-40833000 ---p 40832000 00:00 0
40833000-40933000 rwxp 40833000 00:00 0
40933000-40934000 ---p 40933000 00:00 0
40934000-40a34000 rwxp 40934000 00:00 0
40a34000-40a35000 ---p 40a34000 00:00 0
40a35000-40b35000 rwxp 40a35000 00:00 0
40b35000-40b38000 ---p 40b35000 00:00 0
40b38000-40c36000 rwxp 40b38000 00:00 0
40c36000-40c39000 ---p 40c36000 00:00 0
40c39000-40d37000 rwxp 40c39000 00:00 0
40d37000-40d3a000 ---p 40d37000 00:00 0
40d3a000-40e38000 rwxp 40d3a000 00:00 0
40e38000-40e3b000 ---p 40e38000 00:00 0
40e3b000-40f39000 rwxp 40e3b000 00:00 0
40f39000-40f3c000 ---p 40f39000 00:00 0
40f3c000-4103a000 rwxp 40f3c000 00:00 0
4103a000-4103d000 ---p 4103a000 00:00 0
4103d000-4113b000 rwxp 4103d000 00:00 0
4113b000-4113c000 ---p 4113b000 00:00 0
4113c000-4123c000 rwxp 4113c000 00:00 0
4123c000-4123f000 ---p 4123c000 00:00 0
4123f000-4133d000 rwxp 4123f000 00:00 0
4133d000-41340000 ---p 4133d000 00:00 0
41340000-4143e000 rwxp 41340000 00:00 0
4143e000-41441000 ---p 4143e000 00:00 0
41441000-4153f000 rwxp 41441000 00:00 0
4153f000-41542000 ---p 4153f000 00:00 0
41542000-41640000 rwxp 41542000 00:00 0
2aaaaaaab000-2aaaaaac2000 r-xp 00000000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaaac2000-2aaaaaaec000 rwxp 2aaaaaac2000 00:00 0
2aaaaaaec000-2aaaaaaf0000 r-xs 0004d000 00:1f 7336173 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfview.jar
2aaaaaaf0000-2aaaaaaf3000 r-xs 0001b000 00:1f 7336174 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/junit.jar
2aaaaaaf3000-2aaaaaaf4000 r-xs 00008000 00:1f 7336169 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf4obj.jar
2aaaaaaf4000-2aaaaaaf6000 r-xs 00018000 00:1f 7336167 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/fits.jar
2aaaaaaf6000-2aaaaaaf8000 r-xs 00008000 00:1f 7336168 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf.jar
2aaaaaaf8000-2aaaaaaf9000 r-xs 00004000 00:1f 7336172 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfobj.jar
2aaaaaaf9000-2aaaaaafa000 r-xs 00002000 00:1f 7336166 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar
2aaaaaafa000-2aaaaaafb000 r-xs 0000b000 00:1f 7336170 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5.jar
2aaaaaafb000-2aaaaaafc000 r-xs 00002000 00:1f 7336165 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar
2aaaaaafc000-2aaaaab03000 r-xs 00080000 00:1f 7336178 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/netcdf.jar
2aaaaab03000-2aaaaab04000 r-xs 0000c000 00:1f 7336171 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5obj.jar
2aaaaab04000-2aaaaab06000 r-xs 0000c000 00:1f 29282193 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lax.jar
2aaaaabc1000-2aaaaabc3000 rwxp 00016000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaabc3000-2aaaaabd3000 r-xp 00000000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaabd3000-2aaaaacd2000 ---p 00010000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd2000-2aaaaacd4000 rwxp 0000f000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd4000-2aaaaacd9000 rwxp 2aaaaacd4000 00:00 0
2aaaaacd9000-2aaaaace0000 r-xp 00000000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaace0000-2aaaaade1000 ---p 00007000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaade1000-2aaaaade3000 rwxp 00008000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so
2aaaaade3000-2aaaaade5000 r-xp 00000000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaade5000-2aaaaaee4000 ---p 00002000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee4000-2aaaaaee6000 rwxp 00001000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee6000-2aaaab007000 r-xp 00000000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab007000-2aaaab107000 ---p 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab107000-2aaaab11c000 r-xp 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11c000-2aaaab11f000 rwxp 00136000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11f000-2aaaab125000 rwxp 2aaaab11f000 00:00 0
2aaaab125000-2aaaab883000 r-xp 00000000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaab883000-2aaaab982000 ---p 0075e000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaab982000-2aaaabafa000 rwxp 0075d000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaabafa000-2aaaabb38000 rwxp 2aaaabafa000 00:00 0
2aaaabb4e000-2aaaabbcf000 r-xp 00000000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabbcf000-2aaaabcce000 ---p 00081000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcce000-2aaaabcd0000 rwxp 00080000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcd0000-2aaaabcd7000 r-xp 00000000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabcd7000-2aaaabdd7000 ---p 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd7000-2aaaabdd9000 rwxp 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd9000-2aaaabde6000 r-xp 00000000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabde6000-2aaaabee5000 ---p 0000d000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee5000-2aaaabee8000 rwxp 0000c000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee8000-2aaaabf11000 r-xp 00000000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaabf11000-2aaaac010000 ---p 00029000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac010000-2aaaac017000 rwxp 00028000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac017000-2aaaac018000 r-xp 2aaaac017000 00:00 0
2aaaac018000-2aaaac019000 rwxp 2aaaac018000 00:00 0
2aaaac02d000-2aaaac041000 r-xp 00000000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac041000-2aaaac140000 ---p 00014000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac140000-2aaaac142000 rwxp 00013000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac142000-2aaaac144000 rwxp 2aaaac142000 00:00 0
2aaaac144000-2aaaac14b000 r-xp 00000000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac14b000-2aaaac24c000 ---p 00007000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac24c000-2aaaac24e000 rwxp 00008000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac24e000-2aaaac24f000 rwxp 2aaaac24e000 00:00 0
2aaaac24f000-2aaaac284000 r-xs 00000000 68:08 63071103 /var/db/nscd/passwd
2aaaac284000-2aaaac28c000 rwxs 00000000 68:06 75500767 /tmp/hsperfdata_ts6/4295
2aaaac28c000-2aaaac29a000 r-xp 00000000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac29a000-2aaaac39c000 ---p 0000e000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39c000-2aaaac39f000 rwxp 00010000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39f000-2aaaf4d0b000 rwxp 2aaaac39f000 00:00 0
2aaaf4d0b000-2aaaf4ea1000 r-xs 02fb3000 00:1f 9399626 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/rt.jar
2aaaf4ea1000-2aaaf5046000 rwxp 2aaaf4ea1000 00:00 0
2aaaf5046000-2aaaf51e5000 r-xp 00000000 68:08 54640618 /usr/lib/locale/locale-archive
2aaaf5200000-2aaaf52be000 rwxp 2aaaf5200000 00:00 0
2aaaf52be000-2aaaf5300000 ---p 2aaaf52be000 00:00 0
2aaaf5300000-2aaaf5535000 rwxp 2aaaf5300000 00:00 0
2aaaf5535000-2aaaf5600000 ---p 2aaaf5535000 00:00 0
2aaaf5600000-2aaaf5700000 rwxp 2aaaf5600000 00:00 0
2aaaf5700000-2aaaf5792000 r-xp 00000000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5792000-2aaaf5891000 ---p 00092000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5891000-2aaaf58aa000 rwxp 00091000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf58aa000-2aaaf58cf000 rwxp 2aaaf58aa000 00:00 0
2aaaf58cf000-2aaaf5911000 r-xp 00000000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5911000-2aaaf5a10000 ---p 00042000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5a10000-2aaaf5a1b000 rwxp 00041000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5a1b000-2aaaf5a1d000 rwxp 2aaaf5a1b000 00:00 0
2aaaf5a33000-2aaaf5a43000 r-xp 00000000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5a43000-2aaaf5b43000 ---p 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b43000-2aaaf5b44000 rwxp 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b44000-2aaaf5c46000 r-xp 00000000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5c46000-2aaaf5d46000 ---p 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d46000-2aaaf5d4d000 rwxp 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d4d000-2aaaf5d52000 r-xp 00000000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5d52000-2aaaf5e52000 ---p 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e52000-2aaaf5e53000 rwxp 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e53000-2aaaf5e5b000 r-xp 00000000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5e5b000-2aaaf5f5a000 ---p 00008000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5a000-2aaaf5f5b000 rwxp 00007000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5b000-2aaaf5f5d000 r-xp 00000000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf5f5d000-2aaaf605c000 ---p 00002000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605c000-2aaaf605d000 rwxp 00001000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605d000-2aaaf6062000 r-xp 00000000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6062000-2aaaf6161000 ---p 00005000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6161000-2aaaf6162000 rwxp 00004000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6162000-2aaaf6197000 r-xs 00000000 68:08 63071105 /var/db/nscd/hosts
2aaaf6197000-2aaaf6215000 r-xp 00000000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf6215000-2aaaf6314000 ---p 0007e000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf6314000-2aaaf632a000 rwxp 0007d000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf632a000-2aaaf633b000 rwxp 2aaaf632a000 00:00 0
2aaaf633b000-2aaaf6345000 r-xp 00000000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6345000-2aaaf6444000 ---p 0000a000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6444000-2aaaf6445000 rwxp 00009000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6445000-2aaaf644e000 r-xp 00000000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf644e000-2aaaf654d000 ---p 00009000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654d000-2aaaf654e000 rwxp 00008000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654e000-2aaaf6553000 r-xp 00000000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6553000-2aaaf6652000 ---p 00005000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6652000-2aaaf6653000 rwxp 00004000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6653000-2aaaf6738000 r-xp 00000000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6738000-2aaaf6937000 ---p 000e5000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6937000-2aaaf693b000 rwxp 000e4000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf693b000-2aaaf696e000 rwxp 2aaaf693b000 00:00 0
7ffffffe9000-7ffffffff000 rwxp 7ffffffe9000 00:00 0 [stack]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vdso]

VM Arguments:
jvm_args: -Xmx1024m -Xms64m
java_command: com.zerog.lax.LAX /nfs/users/nfs_t/ts6/download/HDFView/hdfview/./hdfview.lax /tmp/env.properties.4295
Launcher Type: SUN_STANDARD

Environment Variables:
JAVA_HOME=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre
CLASSPATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfview.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/junit.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf4obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/fits.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/netcdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lax.jar:

PATH=/nfs/users/nfs_t/ts6/tools:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/software/bin:/software/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/solexa/bin:/software/solexa/bin:/software/bin:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/nvidia-cuda/cuda/bin

LD_LIBRARY_PATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/../lib/amd64:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/software/badger/lib:/software/oracle_client-10.2.0/lib:/software/solexa/lib

SHELL=/bin/bash
DISPLAY=sf-2-1-03:16.0

Signal Handlers:
SIGSEGV: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGBUS: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGFPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGPIPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGXFSZ: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGILL: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, sa_flags=0x00000000
SIGUSR2: [libjvm.so+0x597750], sa_mask[0]=0x00000000, sa_flags=0x10000004
SIGHUP: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGINT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGTERM: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGQUIT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004

--------------- S Y S T E M ---------------

OS:4.0

uname:Linux 2.6.22.19-lustre-1.6.7.2 #2 SMP Tue Sep 1 09:35:59 BST 2009 x86_64
libc:glibc 2.3.6 NPTL 2.3.6
rlimit: STACK 8515k, CORE infinity, NPROC 137215, NOFILE 1024, AS infinity
load average:0.00 0.00 0.00

CPU:total 8 (4 cores per cpu, 1 threads per core) family 6 model 15 stepping 7, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3

Memory: 4k page, physical 16463988k(10735008k free), swap 8192616k(8192556k free)

vm_info: Java HotSpot(TM) 64-Bit Server VM (14.2-b01) for linux-amd64 JRE (1.6.0_16-b01), built on Jul 31 2009 05:52:33 by "java_re" with gcc 3.2.2 (SuSE Linux)

time: Mon Jul 26 17:49:12 2010
elapsed time: 0 seconds

Thanks, Peter. I'll give it a try tomorrow (the pub beckons...).

--TS

Peter Cao wrote:

···

The error indicates that the DHFView you are using is not compatible to your system.

Our linux64 distribution was built on CentOS (Linux xxxxxx 2.6.18-194.3.1.el5 #1 SMP Thu May 13 13:08:30 EDT 2010 x86_64 x86_64 x86_64 GNU/Linux). At this point, I don't know if the problem is at the packed JRE or the Java HDF library.

Change JAVAPATH to the one used in your system at bin/hdfview.sh and run "hdfview.sh". If it does not work, most likely the
Java HDF library does not work on your system.

Thanks
--pc

Tom Skelly wrote:

Does the attached error log look familiar to anyone? I downloaded and ran hdfview_install_linux64.bin, which installed without complaint. But ./hdfview crashes with SIGFPE on initialisation. The error appears to be connected with the loading of a native library -- but i can't see which one. All the dynamic linraries seem to be coming from HFDView's own installed JRE, or to be standard system libraries -- i.e., there seems to be no interaction with the local java installation. I'm running on a 8-cpu X64 cluster node running Debian linux.

TIA for any advice (and apologies for the long post).

--TS

#
# A fatal error has been detected by the Java Runtime Environment:
#
# SIGFPE (0x8) at pc=0x00002aaaaaab2b83, pid=4295, tid=1076017504
#
# JRE version: 6.0_16-b01
# Java VM: Java HotSpot(TM) 64-Bit Server VM (14.2-b01 mixed mode linux-amd64 )
# Problematic frame:
# C [ld-linux-x86-64.so.2+0x7b83]
#
# If you would like to submit a bug report, please visit:
# http://java.sun.com/webapps/bugreport/crash.jsp
# The crash happened outside the Java Virtual Machine in native code.
# See problematic frame for where to report the bug.
#

--------------- T H R E A D ---------------

Current thread (0x0000000040111800): JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

siginfo:si_signo=SIGFPE: si_errno=0, si_code=1 (FPE_INTDIV), si_addr=0x00002aaaaaab2b83

Registers:
RAX=0x000000000acaff29, RBX=0x0000000000000000, RCX=0x0000000000000000, RDX=0x0000000000000000
RSP=0x0000000040227110, RBP=0x0000000040227300, RSI=0x000000000acaff29, RDI=0x00002aaaf6660029
R8 =0x00002aaaf55232e0, R9 =0x0000000000000000, R10=0x0000000000000000, R11=0x0000000000000001
R12=0x00000000402272c0, R13=0x00002aaaf5523030, R14=0x0000000000000000, R15=0x00002aaaf6655b70
RIP=0x00002aaaaaab2b83, EFL=0x0000000000010246, CSGSFS=0x0000000000000033, ERR=0x0000000000000000
TRAPNO=0x0000000000000000

Top of Stack: (sp=0x0000000040227110)
0x0000000040227110: 0000000000000000 0000000000000000
0x0000000040227120: 00000000402272c0 00002aaaf665a8b0
0x0000000040227130: 000000000acaff29 00002aaaf6660029
0x0000000040227140: 0000000000000000 0000000000000004
0x0000000040227150: 00002aaaf665e498 00002aaaf6664a58
0x0000000040227160: 00000000aaef9001 0000000000000000
0x0000000040227170: 00002aaaab11cad0 00002aaaf5523558
0x0000000040227180: 0000000000000002 00002aaaaaef4388
0x0000000040227190: 0000000040227120 00002aaaf5523380
0x00000000402271a0: 0000000040227300 00000000402272c0
0x00000000402271b0: 000000000acaff29 0000000000000000
0x00000000402271c0: 00002aaaf6660029 00002aaaaaab2f9a
0x00000000402271d0: 0000000000000000 0000000000000001
0x00000000402271e0: 0000000000000000 00002aaa00000000
0x00000000402271f0: 0000000000000004 00000000402273f0
0x0000000040227200: 00002aaaab11cc50 0000000000000000
0x0000000040227210: 0000000400000001 00000000aabc23c8
0x0000000040227220: 0000000000000000 00002aaaf5523378
0x0000000040227230: 00000000402273b8 00002aaaf5523030
0x0000000040227240: 0000000000000000 00002aaaf5522fe0
0x0000000040227250: 0000000040227210 00000000402274c0
0x0000000040227260: 00002aaaf6664a17 00002aaaaaab55c4
0x0000000040227270: 0000000000000001 000000004010ac50
0x0000000040227280: 0000000040227240 00000000402274c0
0x0000000040227290: 00002aaaf6664a0d 00002aaaaaab55c4
0x00000000402272a0: 8009c03400000001 00002aaaf5523030
0x00000000402272b0: 0000000040227270 063144024404a000
0x00000000402272c0: 0000000000000000 0000000000000000
0x00000000402272d0: 2062128234004120 00002aaaf5523030
0x00000000402272e0: 00002aaaf6653000 0000000000000006
0x00000000402272f0: 00002aaaf5523030 00002aaaf6668178
0x0000000040227300: 00000000402273f0 00002aaaaaab4669

Instructions: (pc=0x00002aaaaaab2b83)
0x00002aaaaaab2b73: 8b 85 20 03 00 00 48 89 44 24 48 48 8b 44 24 20
0x00002aaaaaab2b83: 48 f7 f3 49 8b 85 e0 02 00 00 44 8b 24 90 45 85

Stack: [0x000000004012b000,0x000000004022c000], sp=0x0000000040227110, free space=1008k
Native frames: (J=compiled Java code, j=interpreted, Vv=VM code, C=native code)
C [ld-linux-x86-64.so.2+0x7b83]
C [ld-linux-x86-64.so.2+0x9669]
C [libc.so.6+0xfc623]
C [ld-linux-x86-64.so.2+0xb7d1]
C [libdl.so.2+0x1115]

Java frames: (J=compiled Java code, j=interpreted, Vv=VM code)
j java.lang.ClassLoader$NativeLibrary.load(Ljava/lang/String;)V+0
j java.lang.ClassLoader.loadLibrary0(Ljava/lang/Class;Ljava/io/File;)Z+300
j java.lang.ClassLoader.loadLibrary(Ljava/lang/Class;Ljava/lang/String;Z)V+127

j java.lang.Runtime.load0(Ljava/lang/Class;Ljava/lang/String;)V+57
j java.lang.System.load(Ljava/lang/String;)V+7
j ncsa.hdf.hdflib.HDFLibrary.loadH4Lib()V+56
j ncsa.hdf.hdflib.HDFLibrary.<clinit>()V+4
v ~StubRoutines::call_stub
j ncsa.hdf.object.h4.H4File.<clinit>()V+0
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0

j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.object.FileFormat.<clinit>()V+27
v ~StubRoutines::call_stub
j java.lang.Class.forName0(Ljava/lang/String;ZLjava/lang/ClassLoader;)Ljava/lang/Class;+0

j java.lang.Class.forName(Ljava/lang/String;)Ljava/lang/Class;+5
j ncsa.hdf.view.ViewProperties.loadExtClass()Ljava/lang/ClassLoader;+424
j ncsa.hdf.view.HDFView.<init>(Ljava/lang/String;Ljava/util/List;IIII)V+60
j ncsa.hdf.view.HDFView.main([Ljava/lang/String;)V+490
v ~StubRoutines::call_stub
j sun.reflect.NativeMethodAccessorImpl.invoke0(Ljava/lang/reflect/Method;Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+0

j sun.reflect.NativeMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+87

j sun.reflect.DelegatingMethodAccessorImpl.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+6

j java.lang.reflect.Method.invoke(Ljava/lang/Object;[Ljava/lang/Object;)Ljava/lang/Object;+161

j com.zerog.lax.LAX.launch()V+227
j com.zerog.lax.LAX.main([Ljava/lang/String;)V+94
v ~StubRoutines::call_stub

--------------- P R O C E S S ---------------

Java Threads: ( => current thread )
0x00002aaaf5521800 JavaThread "Image Fetcher 1" daemon [_thread_blocked, id=4384, stack(0x000000004153f000,0x0000000041640000)]
0x00002aaaf551b800 JavaThread "Image Fetcher 0" daemon [_thread_blocked, id=4383, stack(0x000000004143e000,0x000000004153f000)]
0x00002aaaf54ed000 JavaThread "AWT-XAWT" daemon [_thread_in_native, id=4382, stack(0x000000004133d000,0x000000004143e000)]
0x00002aaaf5014800 JavaThread "Java2D Disposer" daemon [_thread_blocked, id=4381, stack(0x000000004123c000,0x000000004133d000)]
0x00002aaaf4f77800 JavaThread "Low Memory Detector" daemon [_thread_blocked, id=4379, stack(0x000000004103a000,0x000000004113b000)]
0x00002aaaf4f72800 JavaThread "CompilerThread1" daemon [_thread_blocked, id=4378, stack(0x0000000040f39000,0x000000004103a000)]
0x00002aaaf4f70800 JavaThread "CompilerThread0" daemon [_thread_blocked, id=4377, stack(0x0000000040e38000,0x0000000040f39000)]
0x00002aaaf4f6e800 JavaThread "Signal Dispatcher" daemon [_thread_blocked, id=4376, stack(0x0000000040d37000,0x0000000040e38000)]
0x00002aaaf4f4b800 JavaThread "Finalizer" daemon [_thread_blocked, id=4375, stack(0x0000000040c36000,0x0000000040d37000)]
0x00002aaaf4f4a800 JavaThread "Reference Handler" daemon [_thread_blocked, id=4374, stack(0x0000000040b35000,0x0000000040c36000)]
=>0x0000000040111800 JavaThread "main" [_thread_in_native, id=4364, stack(0x000000004012b000,0x000000004022c000)]

Other Threads:
0x00002aaaf4d08000 VMThread [stack: 0x0000000040a34000,0x0000000040b35000] [id=4373]
0x00002aaaf4f7a000 WatcherThread [stack: 0x000000004113b000,0x000000004123c000] [id=4380]

VM state:not at safepoint (normal execution)

VM Mutex/Monitor currently owned by a thread: None

Heap
PSYoungGen total 19136K, used 5628K [0x00002aaadf310000, 0x00002aaae0860000, 0x00002aaaf4860000)
eden space 16448K, 34% used [0x00002aaadf310000,0x00002aaadf88f108,0x00002aaae0320000)
from space 2688K, 0% used [0x00002aaae05c0000,0x00002aaae05c0000,0x00002aaae0860000)
to space 2688K, 0% used [0x00002aaae0320000,0x00002aaae0320000,0x00002aaae05c0000)
PSOldGen total 43712K, used 0K [0x00002aaab4860000, 0x00002aaab7310000, 0x00002aaadf310000)
object space 43712K, 0% used [0x00002aaab4860000,0x00002aaab4860000,0x00002aaab7310000)
PSPermGen total 21248K, used 9052K [0x00002aaaaf460000, 0x00002aaab0920000, 0x00002aaab4860000)
object space 21248K, 42% used [0x00002aaaaf460000,0x00002aaaafd37310,0x00002aaab0920000)

Dynamic libraries:
40000000-40009000 r-xp 00000000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
40108000-4010a000 rwxp 00008000 00:1f 29395344 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/bin/java
4010a000-4012b000 rwxp 4010a000 00:00 0 [heap]
4012b000-4012e000 ---p 4012b000 00:00 0
4012e000-4022c000 rwxp 4012e000 00:00 0
4022c000-4022d000 ---p 4022c000 00:00 0
4022d000-4032d000 rwxp 4022d000 00:00 0
4032d000-4032e000 ---p 4032d000 00:00 0
4032e000-4042e000 rwxp 4032e000 00:00 0
4042e000-4042f000 ---p 4042e000 00:00 0
4042f000-4052f000 rwxp 4042f000 00:00 0
4052f000-40530000 ---p 4052f000 00:00 0
40530000-40630000 rwxp 40530000 00:00 0
40630000-40631000 ---p 40630000 00:00 0
40631000-40731000 rwxp 40631000 00:00 0
40731000-40732000 ---p 40731000 00:00 0
40732000-40832000 rwxp 40732000 00:00 0
40832000-40833000 ---p 40832000 00:00 0
40833000-40933000 rwxp 40833000 00:00 0
40933000-40934000 ---p 40933000 00:00 0
40934000-40a34000 rwxp 40934000 00:00 0
40a34000-40a35000 ---p 40a34000 00:00 0
40a35000-40b35000 rwxp 40a35000 00:00 0
40b35000-40b38000 ---p 40b35000 00:00 0
40b38000-40c36000 rwxp 40b38000 00:00 0
40c36000-40c39000 ---p 40c36000 00:00 0
40c39000-40d37000 rwxp 40c39000 00:00 0
40d37000-40d3a000 ---p 40d37000 00:00 0
40d3a000-40e38000 rwxp 40d3a000 00:00 0
40e38000-40e3b000 ---p 40e38000 00:00 0
40e3b000-40f39000 rwxp 40e3b000 00:00 0
40f39000-40f3c000 ---p 40f39000 00:00 0
40f3c000-4103a000 rwxp 40f3c000 00:00 0
4103a000-4103d000 ---p 4103a000 00:00 0
4103d000-4113b000 rwxp 4103d000 00:00 0
4113b000-4113c000 ---p 4113b000 00:00 0
4113c000-4123c000 rwxp 4113c000 00:00 0
4123c000-4123f000 ---p 4123c000 00:00 0
4123f000-4133d000 rwxp 4123f000 00:00 0
4133d000-41340000 ---p 4133d000 00:00 0
41340000-4143e000 rwxp 41340000 00:00 0
4143e000-41441000 ---p 4143e000 00:00 0
41441000-4153f000 rwxp 41441000 00:00 0
4153f000-41542000 ---p 4153f000 00:00 0
41542000-41640000 rwxp 41542000 00:00 0
2aaaaaaab000-2aaaaaac2000 r-xp 00000000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaaac2000-2aaaaaaec000 rwxp 2aaaaaac2000 00:00 0
2aaaaaaec000-2aaaaaaf0000 r-xs 0004d000 00:1f 7336173 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfview.jar
2aaaaaaf0000-2aaaaaaf3000 r-xs 0001b000 00:1f 7336174 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/junit.jar
2aaaaaaf3000-2aaaaaaf4000 r-xs 00008000 00:1f 7336169 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf4obj.jar
2aaaaaaf4000-2aaaaaaf6000 r-xs 00018000 00:1f 7336167 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/fits.jar
2aaaaaaf6000-2aaaaaaf8000 r-xs 00008000 00:1f 7336168 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf.jar
2aaaaaaf8000-2aaaaaaf9000 r-xs 00004000 00:1f 7336172 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdfobj.jar
2aaaaaaf9000-2aaaaaafa000 r-xs 00002000 00:1f 7336166 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar
2aaaaaafa000-2aaaaaafb000 r-xs 0000b000 00:1f 7336170 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5.jar
2aaaaaafb000-2aaaaaafc000 r-xs 00002000 00:1f 7336165 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar
2aaaaaafc000-2aaaaab03000 r-xs 00080000 00:1f 7336178 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/netcdf.jar
2aaaaab03000-2aaaaab04000 r-xs 0000c000 00:1f 7336171 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/jhdf5obj.jar
2aaaaab04000-2aaaaab06000 r-xs 0000c000 00:1f 29282193 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lax.jar
2aaaaabc1000-2aaaaabc3000 rwxp 00016000 68:08 62915795 /lib/ld-2.3.6.so
2aaaaabc3000-2aaaaabd3000 r-xp 00000000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaabd3000-2aaaaacd2000 ---p 00010000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd2000-2aaaaacd4000 rwxp 0000f000 68:08 62915797 /lib/libpthread-2.3.6.so
2aaaaacd4000-2aaaaacd9000 rwxp 2aaaaacd4000 00:00 0
2aaaaacd9000-2aaaaace0000 r-xp 00000000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so

2aaaaace0000-2aaaaade1000 ---p 00007000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so

2aaaaade1000-2aaaaade3000 rwxp 00008000 00:1f 21502696 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/jli/libjli.so

2aaaaade3000-2aaaaade5000 r-xp 00000000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaade5000-2aaaaaee4000 ---p 00002000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee4000-2aaaaaee6000 rwxp 00001000 68:08 62915803 /lib/libdl-2.3.6.so
2aaaaaee6000-2aaaab007000 r-xp 00000000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab007000-2aaaab107000 ---p 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab107000-2aaaab11c000 r-xp 00121000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11c000-2aaaab11f000 rwxp 00136000 68:08 62915909 /lib/libc-2.3.6.so
2aaaab11f000-2aaaab125000 rwxp 2aaaab11f000 00:00 0
2aaaab125000-2aaaab883000 r-xp 00000000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaab883000-2aaaab982000 ---p 0075e000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaab982000-2aaaabafa000 rwxp 0075d000 00:1f 26306795 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server/libjvm.so

2aaaabafa000-2aaaabb38000 rwxp 2aaaabafa000 00:00 0
2aaaabb4e000-2aaaabbcf000 r-xp 00000000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabbcf000-2aaaabcce000 ---p 00081000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcce000-2aaaabcd0000 rwxp 00080000 68:08 62914967 /lib/libm-2.3.6.so
2aaaabcd0000-2aaaabcd7000 r-xp 00000000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabcd7000-2aaaabdd7000 ---p 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd7000-2aaaabdd9000 rwxp 00007000 68:08 62915905 /lib/librt-2.3.6.so
2aaaabdd9000-2aaaabde6000 r-xp 00000000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabde6000-2aaaabee5000 ---p 0000d000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee5000-2aaaabee8000 rwxp 0000c000 00:1f 19714398 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libverify.so
2aaaabee8000-2aaaabf11000 r-xp 00000000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaabf11000-2aaaac010000 ---p 00029000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac010000-2aaaac017000 rwxp 00028000 00:1f 21502693 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libjava.so
2aaaac017000-2aaaac018000 r-xp 2aaaac017000 00:00 0
2aaaac018000-2aaaac019000 rwxp 2aaaac018000 00:00 0
2aaaac02d000-2aaaac041000 r-xp 00000000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac041000-2aaaac140000 ---p 00014000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac140000-2aaaac142000 rwxp 00013000 68:08 62915802 /lib/libnsl-2.3.6.so
2aaaac142000-2aaaac144000 rwxp 2aaaac142000 00:00 0
2aaaac144000-2aaaac14b000 r-xp 00000000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac14b000-2aaaac24c000 ---p 00007000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac24c000-2aaaac24e000 rwxp 00008000 00:1f 19714388 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/native_threads/libhpi.so

2aaaac24e000-2aaaac24f000 rwxp 2aaaac24e000 00:00 0
2aaaac24f000-2aaaac284000 r-xs 00000000 68:08 63071103 /var/db/nscd/passwd
2aaaac284000-2aaaac28c000 rwxs 00000000 68:06 75500767 /tmp/hsperfdata_ts6/4295
2aaaac28c000-2aaaac29a000 r-xp 00000000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac29a000-2aaaac39c000 ---p 0000e000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39c000-2aaaac39f000 rwxp 00010000 00:1f 26306798 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libzip.so
2aaaac39f000-2aaaf4d0b000 rwxp 2aaaac39f000 00:00 0
2aaaf4d0b000-2aaaf4ea1000 r-xs 02fb3000 00:1f 9399626 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/rt.jar
2aaaf4ea1000-2aaaf5046000 rwxp 2aaaf4ea1000 00:00 0
2aaaf5046000-2aaaf51e5000 r-xp 00000000 68:08 54640618 /usr/lib/locale/locale-archive
2aaaf5200000-2aaaf52be000 rwxp 2aaaf5200000 00:00 0
2aaaf52be000-2aaaf5300000 ---p 2aaaf52be000 00:00 0
2aaaf5300000-2aaaf5535000 rwxp 2aaaf5300000 00:00 0
2aaaf5535000-2aaaf5600000 ---p 2aaaf5535000 00:00 0
2aaaf5600000-2aaaf5700000 rwxp 2aaaf5600000 00:00 0
2aaaf5700000-2aaaf5792000 r-xp 00000000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5792000-2aaaf5891000 ---p 00092000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf5891000-2aaaf58aa000 rwxp 00091000 00:1f 21502682 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libawt.so
2aaaf58aa000-2aaaf58cf000 rwxp 2aaaf58aa000 00:00 0
2aaaf58cf000-2aaaf5911000 r-xp 00000000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5911000-2aaaf5a10000 ---p 00042000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5a10000-2aaaf5a1b000 rwxp 00041000 00:1f 19714393 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/xawt/libmawt.so

2aaaf5a1b000-2aaaf5a1d000 rwxp 2aaaf5a1b000 00:00 0
2aaaf5a33000-2aaaf5a43000 r-xp 00000000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5a43000-2aaaf5b43000 ---p 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b43000-2aaaf5b44000 rwxp 00010000 68:08 29395420 /usr/lib/libXext.so.6.4.0
2aaaf5b44000-2aaaf5c46000 r-xp 00000000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5c46000-2aaaf5d46000 ---p 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d46000-2aaaf5d4d000 rwxp 00102000 68:08 29395418 /usr/lib/libX11.so.6.2.0
2aaaf5d4d000-2aaaf5d52000 r-xp 00000000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5d52000-2aaaf5e52000 ---p 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e52000-2aaaf5e53000 rwxp 00005000 68:08 29396671 /usr/lib/libXtst.so.6.1.0
2aaaf5e53000-2aaaf5e5b000 r-xp 00000000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5e5b000-2aaaf5f5a000 ---p 00008000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5a000-2aaaf5f5b000 rwxp 00007000 68:08 29395422 /usr/lib/libXi.so.6.0.0
2aaaf5f5b000-2aaaf5f5d000 r-xp 00000000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf5f5d000-2aaaf605c000 ---p 00002000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605c000-2aaaf605d000 rwxp 00001000 68:08 29395398 /usr/lib/libXau.so.6.0.0
2aaaf605d000-2aaaf6062000 r-xp 00000000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6062000-2aaaf6161000 ---p 00005000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6161000-2aaaf6162000 rwxp 00004000 68:08 29395400 /usr/lib/libXdmcp.so.6.0.0
2aaaf6162000-2aaaf6197000 r-xs 00000000 68:08 63071105 /var/db/nscd/hosts
2aaaf6197000-2aaaf6215000 r-xp 00000000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf6215000-2aaaf6314000 ---p 0007e000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf6314000-2aaaf632a000 rwxp 0007d000 00:1f 26306797 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/libfontmanager.so

2aaaf632a000-2aaaf633b000 rwxp 2aaaf632a000 00:00 0
2aaaf633b000-2aaaf6345000 r-xp 00000000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6345000-2aaaf6444000 ---p 0000a000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6444000-2aaaf6445000 rwxp 00009000 68:08 29396655 /usr/lib/libXcursor.so.1.0.2
2aaaf6445000-2aaaf644e000 r-xp 00000000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf644e000-2aaaf654d000 ---p 00009000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654d000-2aaaf654e000 rwxp 00008000 68:08 29396610 /usr/lib/libXrender.so.1.3.0
2aaaf654e000-2aaaf6553000 r-xp 00000000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6553000-2aaaf6652000 ---p 00005000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6652000-2aaaf6653000 rwxp 00004000 68:08 29395428 /usr/lib/libXfixes.so.3.1.0
2aaaf6653000-2aaaf6738000 r-xp 00000000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6738000-2aaaf6937000 ---p 000e5000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf6937000-2aaaf693b000 rwxp 000e4000 00:1f 7336176 /nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/linux/libjhdf.so
2aaaf693b000-2aaaf696e000 rwxp 2aaaf693b000 00:00 0
7ffffffe9000-7ffffffff000 rwxp 7ffffffe9000 00:00 0 [stack]
ffffffffff600000-ffffffffff601000 r-xp 00000000 00:00 0 [vdso]

VM Arguments:
jvm_args: -Xmx1024m -Xms64m
java_command: com.zerog.lax.LAX /nfs/users/nfs_t/ts6/download/HDFView/hdfview/./hdfview.lax /tmp/env.properties.4295
Launcher Type: SUN_STANDARD

Environment Variables:
JAVA_HOME=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre
CLASSPATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfview.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/junit.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf4obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/fits.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdfobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/netcdf.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lib/jhdf5obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/fitsobj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/lib/ext/nc2obj.jar:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/./lax.jar:

PATH=/nfs/users/nfs_t/ts6/tools:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/bin:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/etc:/software/bin:/software/bin:/usr/local/bin:/usr/bin:/bin:/usr/bin/X11:/usr/games:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/solexa/bin:/software/solexa/bin:/software/bin:/software/badger/bin:/software/noarch/badger/bin:/software/oracle_client-10.2.0/bin:/software/nvidia-cuda/cuda/bin

LD_LIBRARY_PATH=/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64/server:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/lib/amd64:/nfs/users/nfs_t/ts6/download/HDFView/hdfview/jre/../lib/amd64:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/usr/local/lsf/6.2/linux2.6-glibc2.3-x86_64/lib:/software/badger/lib:/software/oracle_client-10.2.0/lib:/software/solexa/lib

SHELL=/bin/bash
DISPLAY=sf-2-1-03:16.0

Signal Handlers:
SIGSEGV: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGBUS: [libjvm.so+0x6bddc0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGFPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGPIPE: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGXFSZ: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGILL: [libjvm.so+0x594f90], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGUSR1: SIG_DFL, sa_mask[0]=0x00000000, sa_flags=0x00000000
SIGUSR2: [libjvm.so+0x597750], sa_mask[0]=0x00000000, sa_flags=0x10000004
SIGHUP: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGINT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGTERM: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004
SIGQUIT: [libjvm.so+0x5974a0], sa_mask[0]=0x7ffbfeff, sa_flags=0x10000004

--------------- S Y S T E M ---------------

OS:4.0

uname:Linux 2.6.22.19-lustre-1.6.7.2 #2 SMP Tue Sep 1 09:35:59 BST 2009 x86_64
libc:glibc 2.3.6 NPTL 2.3.6
rlimit: STACK 8515k, CORE infinity, NPROC 137215, NOFILE 1024, AS infinity
load average:0.00 0.00 0.00

CPU:total 8 (4 cores per cpu, 1 threads per core) family 6 model 15 stepping 7, cmov, cx8, fxsr, mmx, sse, sse2, sse3, ssse3

Memory: 4k page, physical 16463988k(10735008k free), swap 8192616k(8192556k free)

vm_info: Java HotSpot(TM) 64-Bit Server VM (14.2-b01) for linux-amd64 JRE (1.6.0_16-b01), built on Jul 31 2009 05:52:33 by "java_re" with gcc 3.2.2 (SuSE Linux)

time: Mon Jul 26 17:49:12 2010
elapsed time: 0 seconds

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